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WormBase Tree Display for Gene: WBGene00034274

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Name Class

WBGene00034274SMapS_parentSequencecb25.fpc3052b
IdentityVersion2
NameCGC_nameCbr-ark-1From_analysisInferred_from_orthology
Sequence_nameCBG13518
Molecular_nameCBG13518a
CBG13518a.1
CBP38021
CBG13518b
CBP47279
CBG13518b.1
Other_nameCBG_13518Accession_evidenceNDBHE600980
Public_nameCbr-ark-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ark-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classark
RNASeq_FPKMWBls:000000212.3498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
19.9784From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.9767From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.6086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.9854From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.7927From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.0065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000331.6861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
36.5815From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.4768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
37.1062From_analysisRNASeq.briggsae.WBls:0000003.control_mean
38.1558From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000432.0832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
33.6791From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
31.2709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.2531From_analysisRNASeq.briggsae.WBls:0000004.control_mean
33.4685From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
34.1679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.9094From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.4275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.69051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.61034From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.0765From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.594From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.5776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003520.7033From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5046From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.9992From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.2913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
18.1587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.82901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.71791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004116.4796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.3425From_analysisRNASeq.briggsae.WBls:0000041.control_mean
34.4536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
34.9854From_analysisRNASeq.briggsae.WBls:0000041.control_median
35.5171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
38.9197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.3525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
17.7109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
25.9056From_analysisRNASeq.briggsae.WBls:0000041.control_mean
26.0823From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006311.6148From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.5639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
12.9513From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
16.0036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
12.7415From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.4775From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.3754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.555From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.9618From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.267From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.6047From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137774
00137775
00137776
Ortholog (29)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine kinase activity. Is an ortholog of C. elegans ark-1. In C. elegans, ark-1 is involved in embryo development; negative regulation of epidermal growth factor receptor signaling pathway; and negative regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13518a
CBG13518b
Corresponding_CDS_historyCBG13518:bp255
Corresponding_transcriptCBG13518a.1
CBG13518b.1
Other_sequence (41)
Experimental_infoExpr_patternExpr1064596
Microarray_resultsGPL8303_CB6_WBGene00034274_A
GPL8303_CB6_WBGene00034274_B
GPL14143_CBG13518_1419-1478_0.788_149_B
GPL14143_CBG13518_1496-1555_0.796_129_A
GPL14143_CBG13518_2729-2788_0.939_5_C
MethodGene