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WormBase Tree Display for Gene: WBGene00034264

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Name Class

WBGene00034264SMapS_parentSequencecb25.fpc3052b
IdentityVersion1
NameSequence_nameCBG13507
Molecular_nameCBG13507
CBG13507.1
CBP36713
Other_nameCBG_13507Accession_evidenceNDBHE600980
Public_nameCBG13507
DB_infoDatabaseNDBlocus_tagCBG_13507
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000233.1664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
34.9298From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
38.7536From_analysisRNASeq.briggsae.WBls:0000002.control_mean
48.1647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
37.1381From_analysisRNASeq.briggsae.WBls:0000002.control_median
38.9018From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.3464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000336.5003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
44.6603From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
52.8203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
27.7001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
39.0069From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000442.0292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
45.6638From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
49.2984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
47.8188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
50.1599From_analysisRNASeq.briggsae.WBls:0000004.control_mean
55.1653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
56.4877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.9016From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.93187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
32.2252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.54769From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.7931From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.0077From_analysisRNASeq.briggsae.WBls:0000027.control_median
30.4677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.4187From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003827.5545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
29.334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
30.1484From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.9628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
34.8484From_analysisRNASeq.briggsae.WBls:0000038.control_mean
51.5422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004128.9346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
39.3633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
43.2395From_analysisRNASeq.briggsae.WBls:0000041.control_mean
45.73From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.0967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
52.5635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
29.3145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
40.8902From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.2159From_analysisRNASeq.briggsae.WBls:0000041.control_median
43.0685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
38.5185From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.9558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
41.8206From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
47.9584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
61.8575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
39.5961From_analysisRNASeq.briggsae.WBls:0000063.control_mean
43.4024From_analysisRNASeq.briggsae.WBls:0000063.control_median
44.9842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010134.5822From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.9128From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.2431From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
37.9234From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00137758
00137759
00137760
Ortholog (33)
ParalogWBGene00026134Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable rRNA primary transcript binding activity. Predicted to be involved in rRNA processing. Is an ortholog of C. elegans ZK795.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13507
Corresponding_CDS_historyCBG13507:bp194
Corresponding_transcriptCBG13507.1
Other_sequence (52)
Experimental_infoExpr_patternExpr1062360
Microarray_resultsGPL8303_CB6_WBGene00034264_A
GPL8303_CB6_WBGene00034264_B
GPL14143_CBG13507_464-523_0.812_59_C
GPL14143_CBG13507_567-626_0.907_7_B
GPL14143_CBG13507_763-822_0.939_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene