WormBase Tree Display for Gene: WBGene00034176

WBGene00034176 SMap: S_parent: Sequence: cb25.fpc3052a
  Identity: Version: 2
    Name: CGC_name: Cbr-lact-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13402
      Molecular_name: CBG13402
        CBG13402.1
        CBP30665
      Other_name: CBG_13402 Accession_evidence: NDB HE600919
      Public_name: Cbr-lact-2
    DB_info: Database: NDB locus_tag CBG_13402
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-lact-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lact
    RNASeq_FPKM: WBls:0000002 20.3734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        26.2254 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        26.751 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        31.5517 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        26.542 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        27.1213 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        27.4917 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 13.588 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        16.7512 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        19.9144 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        18.6298 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        22.3871 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 14.4495 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        14.7243 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        14.9991 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        10.1117 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        12.3233 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        13.3279 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        14.7557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 14.8088 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        18.0214 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        34.5626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.69293 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        21.4615 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        23.2952 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        31.7815 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 8.03249 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.1416 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        10.7697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        15.1426 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        15.764 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        19.5156 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        22.6289 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 14.5476 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        14.6702 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        14.8632 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        15.0563 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        18.4119 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        29.3734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        16.5157 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        17.9751 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        19.9909 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        28.3229 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 23.4534 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        26.8433 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        28.8368 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        29.0576 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        31.5063 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        34.6481 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        14.9093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        26.6995 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        27.84 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 17.0843 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        19.318 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        17.5297 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        19.4811 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00023987 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00023804 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025983 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027685 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032217 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037458 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039555 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041642 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. Is an ortholog of C. elegans lact-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG13402
    Corresponding_CDS_history: CBG13402:bp194
    Corresponding_transcript: CBG13402.1
    Other_sequence (66)
  Experimental_info: Expr_pattern: Expr1062663
    Microarray_results: GPL8303_CB6_WBGene00034176_A
      GPL8303_CB6_WBGene00034176_B
      GPL14143_CBG13402_1072-1131_0.814_2_C
      GPL14143_CBG13402_1361-1420_0.694_91_B
      GPL14143_CBG13402_1409-1468_0.766_34_A
  Method: Gene