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WormBase Tree Display for Gene: WBGene00033924

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Name Class

WBGene00033924SMapS_parentSequencecb25.fpc2969
IdentityVersion1
NameSequence_nameCBG13098
Molecular_nameCBG13098a
CBG13098a.1
CBP22787
CBG13098b
CBP44239
CBG13098b.1
Other_nameCBG_13098Accession_evidenceNDBHE601401
Public_nameCBG13098
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000023.40492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.16204From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.00108From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.08013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.00123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.12184From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.50115From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.111933From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.223865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.074622From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.177175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.415074From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.652972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.205895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.357486From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.371994From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.379392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.122365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.290126From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.15386From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.0491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.66961From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.79584From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.72175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.933315From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.280792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.836003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
13.0223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.67978From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.16566From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.52355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.026From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.7989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.0503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.58093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.25319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.67083From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.86933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.67261From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006314.3801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.1273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.3726From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.0839From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.7592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
34.7803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.25From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.2649From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.16993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.78936From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.93592From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.16291From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.16695From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00033922Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00033923Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00034474Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00033938Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00027258Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030113Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032290Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033736Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042611Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042863Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. Is an ortholog of C. elegans E04F6.15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13098a
CBG13098b
Corresponding_CDS_historyCBG13098:bp194
Corresponding_transcriptCBG13098a.1
CBG13098b.1
Other_sequenceEX554411.1
ACC09351_1
EX563461.1
FK802606.1
Experimental_infoExpr_patternExpr1055858
Microarray_resultsGPL8303_CB6_WBGene00033924_A
GPL14143_CBG13098_66-125_0.713_90_B
GPL14143_CBG13098_345-404_0.878_18_C
GPL14143_CBG13098_835-894_0.959_1_A
MethodGene