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WormBase Tree Display for Gene: WBGene00033870

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Name Class

WBGene00033870SMapS_parentSequencecb25.fpc2888c
IdentityVersion2
NameCGC_nameCbr-nhx-2From_analysisInferred_from_orthology
Sequence_nameCBG13035
Molecular_nameCBG13035
CBG13035.1
CBP17702
Other_nameCBG_13035Accession_evidenceNDBHE600938
Public_nameCbr-nhx-2
DB_infoDatabaseNDBlocus_tagCBG_13035
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhx-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhx
RNASeq_FPKMWBls:000000226.9713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
33.4423From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
44.7675From_analysisRNASeq.briggsae.WBls:0000002.control_mean
73.8889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.8538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
30.2068From_analysisRNASeq.briggsae.WBls:0000002.control_median
38.2891From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.08867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.95107From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.81347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.94241From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.94818From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.6582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.6786From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.6991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.5434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.4698From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.5252From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.6783From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.36979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
31.9922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.67288From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.3325From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.6876From_analysisRNASeq.briggsae.WBls:0000027.control_mean
48.7154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003538.233From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.2316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
41.8448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
49.1678From_analysisRNASeq.briggsae.WBls:0000038.control_median
50.3771From_analysisRNASeq.briggsae.WBls:0000038.control_mean
56.4908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
92.9412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004113.6415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
13.9575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
14.5774From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.9532From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.1973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.0165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.6956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
13.1563From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.7995From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.42948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006339.7382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
40.541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
45.9988From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
46.9151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
46.9906From_analysisRNASeq.briggsae.WBls:0000063.control_mean
61.7599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
24.5199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
43.2455From_analysisRNASeq.briggsae.WBls:0000063.control_mean
43.2699From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010131.9922From_analysisRNASeq.briggsae.total_over_all_stages.control_median
33.8841From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.098From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.7313From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137283
00137284
00137285
00137286
00137287
00137288
00137289
00137290
Ortholog (33)
ParalogWBGene00024151Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024155Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027158Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028502Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029852Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032172Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036357Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037143Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sodium:proton antiporter activity. Predicted to be involved in proton transmembrane transport; regulation of pH; and sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans nhx-2. In C. elegans, nhx-2 is involved in several processes, including determination of adult lifespan; positive regulation of growth rate; and regulation of transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13035
Corresponding_CDS_historyCBG13035:bp194
CBG13035:bp255
Corresponding_transcriptCBG13035.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1052104
Microarray_resultsGPL8303_CB6_WBGene00033870_A
GPL8303_CB6_WBGene00033870_B
GPL14143_CBG13035_1008-1067_0.787_11_B
GPL14143_CBG13035_1012-1071_0.707_79_C
GPL14143_CBG13035_1147-1206_0.771_26_A
MethodGene