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WormBase Tree Display for Gene: WBGene00033577

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Name Class

WBGene00033577SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-spg-20From_analysisInferred_from_orthology
Sequence_nameCBG12661
Molecular_nameCBG12661
CBG12661.1
CBP09132
Other_nameCBG_12661Accession_evidenceNDBHE600940
Public_nameCbr-spg-20
DB_infoDatabaseNDBlocus_tagCBG_12661
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
226 Apr 2016 12:32:00WBPerson2970Name_changeCGC_nameCbr-spg-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classspg
RNASeq_FPKMWBls:000000216.4637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
17.9588From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.5917From_analysisRNASeq.briggsae.WBls:0000002.control_mean
30.3527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.2889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
17.2113From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.766From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.0209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
17.7751From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
22.5293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
16.7036From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.4179From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.6573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.04437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
9.85083From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.96124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.30958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.13566From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.70581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.407233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.0757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.69381From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.05891From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.7096From_analysisRNASeq.briggsae.WBls:0000027.control_mean
38.6618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.88476From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003519.7464From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.61313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.8256From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.583From_analysisRNASeq.briggsae.WBls:0000038.control_mean
25.9139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
43.0675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.73728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004117.653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
19.5779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
21.997From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.4162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
24.8976From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.9435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.1798From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.5683From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
57.8424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.3469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.74449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.59995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.94903From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.01044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.73016From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.3184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.97973From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.66153From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010116.4637From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.7962From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.5837From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.1279From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136990
00136991
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in peroxisome inheritance. Predicted to be extrinsic component of intraperoxisomal membrane. Is an ortholog of C. elegans spg-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12661
Corresponding_CDS_historyCBG12661:bp194
Corresponding_transcriptCBG12661.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1050105
Microarray_resultsGPL8303_CB6_WBGene00033577_A
GPL8303_CB6_WBGene00033577_B
GPL14143_CBG12661_1033-1092_0.908_26_C
GPL14143_CBG12661_1216-1275_0.932_16_A
GPL14143_CBG12661_1322-1381_0.968_1_B
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
ReferenceWBPaper00063946
MethodGene