Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00033515

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00033515SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-col-58From_analysisInferred_from_orthology
Sequence_nameCBG12587
Molecular_nameCBG12587
CBG12587.1
CBP36575
Other_nameCBG_12587Accession_evidenceNDBHE600940
Public_nameCbr-col-58
DB_infoDatabaseNDBlocus_tagCBG_12587
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-col-58
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:000000221.81From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.8419From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.2522From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.1048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
23.8266From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.326From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.54959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.46374From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.92749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.72363From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.24339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.99827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
5.54196From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.08565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.65582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.89938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.73834From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.05258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (11)
WBls:0000027166.302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
37.4259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
78.1227From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
93.9502From_analysisRNASeq.briggsae.WBls:0000027.control_mean
122.212From_analysisRNASeq.briggsae.WBls:0000027.control_median
149.072From_analysisRNASeq.briggsae.WBls:0000027.control_mean
314.437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.12112From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038112.954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
48.9308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
49.9329From_analysisRNASeq.briggsae.WBls:0000038.control_median
50.935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
55.4026From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.79077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000411.36381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
16.0991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.11973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.53832From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.13489From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.95691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.63124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.32355From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.53111From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.01587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.4786From_analysisRNASeq.briggsae.WBls:0000063.control_mean
19.6327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.67223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.65745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.77073From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.6597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.16556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.71409From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.9264From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010124.4352From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.77073From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.0335From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.28273From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00136930
Ortholog (24)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-58.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12587
Corresponding_CDS_historyCBG12587:bp194
Corresponding_transcriptCBG12587.1
Other_sequenceAI665784.1
BG734301.1
CBC13286_1
ACC16235_1
AM744822.1
CK854776.1
AW313036.1
TDC02402_1
AA294675.1
AM744200.1
Experimental_infoExpr_patternExpr1059125
Microarray_resultsGPL8303_CB6_WBGene00033515_A
GPL8303_CB6_WBGene00033515_B
GPL14143_CBG12587_160-219_0.794_45_B
GPL14143_CBG12587_573-632_0.929_2_C
GPL14143_CBG12587_810-869_0.946_1_A
MethodGene