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WormBase Tree Display for Gene: WBGene00033486

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Name Class

WBGene00033486SMapS_parentSequencecb25.fpc2888a2
IdentityVersion1
NameSequence_nameCBG12554
Molecular_nameCBG12554a
CBG12554a.1
CBP46388
CBG12554b
CBP44493
CBG12554b.1
Other_nameCBG_12554Accession_evidenceNDBHE600940
Public_nameCBG12554
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00118642
RNASeq_FPKMWBls:000000212.5719From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.9853From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.8456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.88496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.4857From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.606From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.2268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000036.43633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.86591From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.29549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
7.60949From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
7.78044From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.1709From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.4916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.85022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.55586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.86676From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.99669From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.539072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.19764From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.2026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.97977From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.92444From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.65125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.89764From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.10495From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.57291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.4083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.6955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.71355From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.7316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.35208From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004115.1488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
25.618From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.7519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
28.8696From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.9873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.5841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
19.5633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
23.5644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
24.2666From_analysisRNASeq.briggsae.WBls:0000041.control_mean
26.1581From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.6636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
10.7269From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.5473From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.0638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.3956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.88678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.8954From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.7926From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.0187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.2505From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.88678From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.0529From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.6194From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136880
Ortholog (40)
Structured_descriptionAutomated_descriptionPredicted to be part of WASH complex. Is an ortholog of C. elegans T05E7.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12554a
CBG12554b
Corresponding_CDS_historyCBG12554:bp194
CBG12554:bp255
Corresponding_transcriptCBG12554a.1
CBG12554b.1
Other_sequenceCBC00338_1
Experimental_infoExpr_patternExpr1066593
Microarray_resultsGPL8303_CB6_WBGene00033486_A
GPL8303_CB6_WBGene00033486_B
GPL8303_CB6_WBGene00033486_C
GPL14143_CBG12554_2804-2863_0.934_9_C
GPL14143_CBG12554_2855-2914_0.944_5_B
GPL14143_CBG12554_3059-3118_0.972_1_A
MethodGene