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WormBase Tree Display for Gene: WBGene00033444

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Name Class

WBGene00033444SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-slc-25A42From_analysisInferred_from_orthology
Sequence_nameCBG12501
Molecular_nameCBG12501
CBG12501.1
CBP17529
CBG12501.2
Other_nameCBG_12501Accession_evidenceNDBHE600940
Public_nameCbr-slc-25A42
DB_infoDatabaseNDBlocus_tagCBG_12501
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
227 Apr 2016 15:17:10WBPerson2970Name_changeCGC_nameCbr-slc-25A42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classslc
AlleleWBVar00118597
WBVar00118598
WBVar00118595
WBVar00118596
RNASeq_FPKMWBls:000000214.0777From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
17.5268From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.39377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.5514From_analysisRNASeq.briggsae.WBls:0000002.control_median
17.0251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
17.4014From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000314.2073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.745From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.2826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
16.9219From_analysisRNASeq.briggsae.WBls:0000003.control_mean
19.2757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000417.2635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
18.5289From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
19.7943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
14.7765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
16.2319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.271From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.2887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.537623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.0287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.14409From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.2368From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.5298From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.90648From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.91551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.4285From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
13.0126From_analysisRNASeq.briggsae.WBls:0000038.control_mean
26.9565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.87154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.82352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.11116From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004120.5079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
23.3801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
24.2059From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.7344From_analysisRNASeq.briggsae.WBls:0000041.control_mean
25.0316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
30.0181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.5249From_analysisRNASeq.briggsae.WBls:0000041.control_median
29.5879From_analysisRNASeq.briggsae.WBls:0000041.control_mean
34.2836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
44.3064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006313.2899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.6941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.4732From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.3931From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.7462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
25.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.8507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
15.162From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.9694From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010114.6941From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.972From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.7509From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.3722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136829
Ortholog (33)
Paralog (34)
Structured_descriptionAutomated_descriptionPredicted to be involved in transmembrane transport. Is an ortholog of C. elegans slc-25A42.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12501
Corresponding_CDS_historyCBG12501:bp194
Corresponding_transcriptCBG12501.1
CBG12501.2
Other_sequence (37)
Experimental_infoExpr_patternExpr1050824
Expr1063138
Microarray_resultsGPL8303_CB6_WBGene00033444_A
GPL8303_CB6_WBGene00033444_B
GPL8303_CB6_WBGene00033445_A
GPL8303_CB6_WBGene00033445_B
GPL14143_CBG12501_659-718_0.922_11_B
GPL14143_CBG12501_786-845_0.961_1_C
GPL14143_CBG12501_813-872_0.954_2_A
GPL14143_CBG12502_711-770_0.878_23_C
GPL14143_CBG12502_768-827_0.951_1_A
GPL14143_CBG12502_964-1023_0.936_6_B
MethodGene