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WormBase Tree Display for Gene: WBGene00033378

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Name Class

WBGene00033378SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-acr-19From_analysisInferred_from_orthology
Sequence_nameCBG12425
Molecular_nameCBG12425a
CBG12425a.1
CBP17514
CBG12425b
CBP42136
CBG12425b.1
Other_nameCBG_12425Accession_evidenceNDBHE600913
Public_nameCbr-acr-19
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-acr-19
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
AlleleWBVar00014557
RNASeq_FPKMWBls:00000021.80236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.82556From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.67099From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.38506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.31876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.81396From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.33294From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.165364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.25464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.343917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.16976From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.947319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.56693From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.18655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.13313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.48442From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.62393From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.36822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.136216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.970274From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.23546From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.5999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.86293From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.86549From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.75558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.5287From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.31364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.26116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.97861From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.03826From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.69606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.88217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.166413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.191059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.207585From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.224112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.461403From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.26403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.744071From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.896857From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.39184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.14369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.205117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.22103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.33545From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.367713From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.5253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.551667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.348965From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.362479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.366841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.970274From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.90886From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.2626From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.8504From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136748
00136749
00136750
00136751
00136752
00136753
00136754
00136755
Ortholog (26)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-19.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12425a
CBG12425b
Corresponding_CDS_historyCBG12425:bp194
Corresponding_transcriptCBG12425a.1
CBG12425b.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1058067
Microarray_resultsGPL8303_CB6_WBGene00033378_A
GPL8303_CB6_WBGene00033378_B
GPL14143_CBG12425_832-891_0.874_27_B
GPL14143_CBG12425_958-1017_0.899_13_C
GPL14143_CBG12425_1499-1558_0.946_1_A
MethodGene