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WormBase Tree Display for Gene: WBGene00033348

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Name Class

WBGene00033348SMapS_parentSequencecb25.fpc2887d2
IdentityVersion1
NameSequence_nameCBG12392
Molecular_nameCBG12392
CBG12392.1
CBP17438
Other_nameCBG_12392Accession_evidenceNDBHE600913
Public_nameCBG12392
DB_infoDatabaseNDBlocus_tagCBG_12392
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00008984
RNASeq_FPKMWBls:00000021.93363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.39369From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.41303From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.8344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.39423From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.39586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.40444From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.591735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.739293From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.88685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.452315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.643633From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.568328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.622765From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.677201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.694213From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.722239From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.777356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.894099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.24158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.689615From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.21874From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.72503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.73116From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.35723From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.77271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.19487From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.407818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.11958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.4697From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.76783From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.81982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.72412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.58712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.21193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.39226From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.57258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.5506From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.83079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.8418From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.91737From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.26216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.58625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.4389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.73958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.06424From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.8714From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.6445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.46977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.5342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.90191From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.3152From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.81982From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.12703From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.5097From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.08034From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136715
Ortholog (23)
ParalogWBGene00029643Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable microtubule binding activity. Is an ortholog of C. elegans T08G11.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12392
Corresponding_CDS_historyCBG12392:bp194
CBG12392:bp255
Corresponding_transcriptCBG12392.1
Other_sequenceAcan_isotig09886
Experimental_infoExpr_patternExpr1053802
Microarray_resultsGPL8303_CB6_WBGene00033348_A
GPL8303_CB6_WBGene00033348_B
GPL14143_CBG12392_951-1010_0.896_8_B
GPL14143_CBG12392_955-1014_0.861_22_C
GPL14143_CBG12392_1409-1468_0.926_3_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
MethodGene