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WormBase Tree Display for Gene: WBGene00033230

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Name Class

WBGene00033230SMapS_parentSequencecb25.fpc2887c
IdentityVersion2
NameCGC_nameCbr-coq-5From_analysisInferred_from_orthology
Sequence_nameCBG12254
Molecular_nameCBG12254
CBG12254.1
CBP41342
Other_nameCBG_12254Accession_evidenceNDBHE600962
Public_nameCbr-coq-5
DB_infoDatabaseNDBlocus_tagCBG_12254
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-coq-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcoq
RNASeq_FPKMWBls:000000226.5043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
33.6427From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
38.2276From_analysisRNASeq.briggsae.WBls:0000002.control_mean
54.5359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
34.0053From_analysisRNASeq.briggsae.WBls:0000002.control_median
34.368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
37.2627From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000318.6514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
18.6814From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
18.7113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
20.022From_analysisRNASeq.briggsae.WBls:0000003.control_mean
22.7034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000428.4284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
28.9846From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.5408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.2793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
26.9337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.3904From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.77From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.1422From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
28.9152From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.09305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
69.5104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
23.1453From_analysisRNASeq.briggsae.WBls:0000027.control_median
29.9735From_analysisRNASeq.briggsae.WBls:0000027.control_mean
33.1483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003541.4185From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038117.432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
22.7134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
33.5971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
41.3908From_analysisRNASeq.briggsae.WBls:0000038.control_median
49.1844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
55.7317From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004148.7343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
55.4941From_analysisRNASeq.briggsae.WBls:0000041.control_mean
56.8298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
56.9134From_analysisRNASeq.briggsae.WBls:0000041.control_median
56.997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
59.4153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
57.3649From_analysisRNASeq.briggsae.WBls:0000041.control_mean
57.7994From_analysisRNASeq.briggsae.WBls:0000041.control_median
58.6018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
63.6112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006349.2284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
52.0385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
55.7119From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
57.5597From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
72.5138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.0095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
53.8752From_analysisRNASeq.briggsae.WBls:0000063.control_median
53.968From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010143.0934From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
48.7343From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.7569From_analysisRNASeq.briggsae.total_over_all_stages.control_median
41.5035From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136586
Ortholog (29)
ParalogWBGene00025429Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026062Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028811Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030429Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030510Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031823Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031825Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035816Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270733Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable methyltransferase activity. Is an ortholog of C. elegans coq-5. In C. elegans, coq-5 is involved in ubiquinone biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12254
Corresponding_CDS_historyCBG12254:bp194
CBG12254:bp255
Corresponding_transcriptCBG12254.1
Other_sequence (67)
Experimental_infoExpr_patternExpr1051186
Microarray_resultsGPL8303_CB6_WBGene00033230_A
GPL8303_CB6_WBGene00033230_B
GPL14143_CBG12254_526-585_0.882_35_C
GPL14143_CBG12254_640-699_0.945_2_A
GPL14143_CBG12254_747-806_0.958_1_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene