WormBase Tree Display for Gene: WBGene00033209

WBGene00033209 SMap: S_parent: Sequence: cb25.fpc2887b
  Identity: Version: 2
    Name: CGC_name: Cbr-fath-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12227
      Molecular_name: CBG12227
        CBG12227.1
        CBP03019
      Other_name: CBG_12227 Accession_evidence: NDB HE600958
      Public_name: Cbr-fath-1
    DB_info: Database: NDB locus_tag CBG_12227
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:02 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 16 Feb 2017 15:39:40 WBPerson2970 Name_change: CGC_name: Cbr-fath-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fath
    RNASeq_FPKM: WBls:0000002 68.1249 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        70.4929 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        70.7851 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        73.7376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        110.527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        72.1152 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        80.7206 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 115.308 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        123.551 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        131.794 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        115.797 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        120.966 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 85.818 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        89.9106 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        94.0032 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        105.566 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        79.7162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        80.3451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        89.0897 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 12.5572 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.53932 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        32.8415 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        83.428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        47.8502 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        47.9926 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        92.8764 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 67.7454 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 120.959 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        48.6282 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        55.9999 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        60.4936 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        63.3716 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        9.01543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 103.747 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        119.408 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        120.946 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        122.484 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        123.404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        49.6931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        60.758 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        77.7915 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        92.2564 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        98.5997 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 40.8021 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        44.3211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        48.4942 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        52.492 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        53.8182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        75.0242 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        51.1562 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        53.9089 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        60.9933 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 67.7426 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        67.7454 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        72.1152 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        72.3397 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00136561
      00136562
      00136563
      00136564
      00136565
      00136566
    Ortholog (32)
    Paralog: WBGene00033211 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable fatty acid alpha-hydroxylase activity and iron ion binding activity. Predicted to be involved in lipid biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans fath-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12227
    Corresponding_CDS_history: CBG12227:bp194
    Corresponding_transcript: CBG12227.1
    Other_sequence (33)
  Experimental_info: Expr_pattern: Expr1054436
    Microarray_results: GPL8303_CB6_WBGene00033209_A
      GPL14143_CBG12227_17-76_0.870_22_B
      GPL14143_CBG12227_123-182_0.870_21_A
      GPL14143_CBG12227_681-740_0.943_3_C
  Method: Gene