Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00032895

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00032895SMapS_parentSequencecb25.fpc2695
IdentityVersion2
NameCGC_nameCbr-lin-10From_analysisInferred_from_orthology
Sequence_nameCBG11848
Molecular_nameCBG11848a
CBG11848a.1
CBP39842
CBG11848b
CBP47293
CBG11848b.1
Other_nameCBG_11848Accession_evidenceNDBHE601268
Public_nameCbr-lin-10
DB_infoDatabaseNDBlocus_tagCBG_11848
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
Allele (20)
RNASeq_FPKMWBls:000000210.2583From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.5496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.4846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.74067From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.47326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.10697From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.31203From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000311.6609From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
13.5373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.78454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
11.0329From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
11.4516From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000439.9631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.7128From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
41.4625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
39.1358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
41.1747From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.4632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
42.849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002710.6786From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.2071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.1683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
9.66034From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.1375From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.4337From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.5144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003518.7798From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7912From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.4468From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.3688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.0658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.20518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.52483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000417.20094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.6699From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.92638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.99224From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.0581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.49417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.99447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.51087From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.39116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006315.9069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.3271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.621From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.9384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.9484From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.9487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.4741From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.5432From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.51693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.9482From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.9757From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.2609From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.6228From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: PH-like domain superfamily; Phosphotyrosine interaction domain (PTB/PID); PTB/PI domain; PDZ superfamily; and PDZ domain. Is an ortholog of C. elegans lin-10. In C. elegans, lin-10 is involved in several processes, including neuron-neuron synaptic transmission; positive regulation of backward locomotion; and protein localization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11848a
CBG11848b
Corresponding_CDS_historyCBG11848:bp194
CBG11848:bp212
CBG11848a:bp255
CBG11848b:bp255
Corresponding_transcriptCBG11848a.1
CBG11848b.1
Other_sequence (82)
Experimental_infoExpr_patternExpr1050543
Microarray_resultsGPL8303_CB6_WBGene00032895_A
GPL8303_CB6_WBGene00032895_B
GPL8303_CB6_WBGene00032895_C
GPL8303_CB6_WBGene00032895_D
GPL8303_CB6_WBGene00032895_E
GPL14143_CBG11848_3083-3142_0.733_166_C
GPL14143_CBG11848_3172-3231_0.934_5_A
GPL14143_CBG11848_3239-3298_0.672_234_B
MethodGene