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WormBase Tree Display for Gene: WBGene00032807

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Name Class

WBGene00032807SMapS_parentSequencecb25.fpc2587
IdentityVersion2
NameCGC_nameCbr-lgc-46From_analysisInferred_from_orthology
Sequence_nameCBG11729
Molecular_nameCBG11729
CBG11729.1
CBP08913
Other_nameCBG_11729Accession_evidenceNDBHE601289
Public_nameCbr-lgc-46
DB_infoDatabaseNDBlocus_tagCBG_11729
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-lgc-46
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
AlleleWBVar00013632
WBVar00013617
WBVar00013622
WBVar00013627
RNASeq_FPKMWBls:00000023.31858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.80437From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.41235From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.68219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.42577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.95972From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.36547From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.61349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.953185From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.29288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.41761From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.34647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.59737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
4.19376From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.79014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.92955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.17867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.84818From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.74519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.289283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.859269From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.51971From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.41059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.13493From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.49754From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000356.66825From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.388055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.67403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.98778From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.30152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.53913From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.79292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.299931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.354467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.391061From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.427654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.912518From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.56802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.23574From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.41872From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.04382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.81845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.234703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.292597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.355487From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.638829From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.00593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.30543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.605965From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.675098From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.856444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.56802From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.16667From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.62103From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.01602From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136162
00136163
00136164
00136165
00136166
00136167
Ortholog (31)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-46.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11729
Corresponding_CDS_historyCBG11729:bp194
CBG11729:bp255
Corresponding_transcriptCBG11729.1
Other_sequence (28)
Experimental_infoExpr_patternExpr1059790
Microarray_resultsGPL8303_CB6_WBGene00032807_A
GPL8303_CB6_WBGene00032807_B
GPL14143_CBG11729_1209-1268_0.933_5_C
GPL14143_CBG11729_1284-1343_0.926_12_A
GPL14143_CBG11729_1474-1533_0.947_2_B
MethodGene