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WormBase Tree Display for Gene: WBGene00032371

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Name Class

WBGene00032371SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-tcer-1From_analysisInferred_from_orthology
Sequence_nameCBG11210
Molecular_nameCBG11210
CBG11210.1
CBP08852
Other_nameCBG_11210Accession_evidenceNDBHE601002
Public_nameCbr-tcer-1
DB_infoDatabaseNDBlocus_tagCBG_11210
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
201 Sep 2009 14:49:44WBPerson2970Name_changeCGC_nameCbr-tcer-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtcer
RNASeq_FPKMWBls:0000002109.87From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
35.3353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
75.0037From_analysisRNASeq.briggsae.WBls:0000002.control_mean
79.8058From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
73.2372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
74.5621From_analysisRNASeq.briggsae.WBls:0000002.control_mean
76.5215From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003266.775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
306.424From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
346.074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
263.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
292.223From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004103.967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
106.548From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
109.129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
101.789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
103.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
106.558From_analysisRNASeq.briggsae.WBls:0000004.control_mean
114.769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002713.8811From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
24.493From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.11018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
54.4876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
32.9099From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.1843From_analysisRNASeq.briggsae.WBls:0000027.control_median
58.1606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003567.1949From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.9115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
44.0555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
51.8824From_analysisRNASeq.briggsae.WBls:0000038.control_mean
59.0829From_analysisRNASeq.briggsae.WBls:0000038.control_median
74.1102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
77.4525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041126.401From_analysisRNASeq.briggsae.WBls:0000041.control_mean
137.288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
141.625From_analysisRNASeq.briggsae.WBls:0000041.control_median
145.962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
146.919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
75.4356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
110.429From_analysisRNASeq.briggsae.WBls:0000041.control_mean
111.582From_analysisRNASeq.briggsae.WBls:0000041.control_median
71.0948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
85.8754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063118.978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
53.668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
54.5441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
58.4001From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
59.0206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
68.9222From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.7104From_analysisRNASeq.briggsae.WBls:0000063.control_median
71.2765From_analysisRNASeq.briggsae.WBls:0000063.control_mean
83.048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010174.1102From_analysisRNASeq.briggsae.total_over_all_stages.control_median
87.4507From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
76.4441From_analysisRNASeq.briggsae.total_over_all_stages.control_median
91.8685From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0853
Ortholog (32)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WW domain; FF domain superfamily; FF domain; and WW domain superfamily. Is an ortholog of C. elegans tcer-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11210
Corresponding_CDS_historyCBG11210:bp194
CBG11210:bp255
Corresponding_transcriptCBG11210.1
Other_sequence (68)
Experimental_infoExpr_patternExpr1061710
Microarray_resultsGPL8303_CB6_WBGene00032371_A
GPL8303_CB6_WBGene00032371_B
GPL14143_CBG11210_1842-1901_0.760_60_B
GPL14143_CBG11210_2137-2196_0.759_63_A
GPL14143_CBG11210_2591-2650_0.797_11_C
MethodGene