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WormBase Tree Display for Gene: WBGene00032343

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Name Class

WBGene00032343SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-hrpl-1From_analysisInferred_from_orthology
Sequence_nameCBG11180
Molecular_nameCBG11180
CBG11180.1
CBP38111
Other_nameCBG_11180Accession_evidenceNDBHE601002
Public_nameCbr-hrpl-1
DB_infoDatabaseNDBlocus_tagCBG_11180
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
222 Dec 2017 13:03:49WBPerson1983Name_changeCGC_nameCbr-hrpl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhrpl
RNASeq_FPKMWBls:000000217.1504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.0687From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.9454From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.1104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.8305From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.0279From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.1158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000356.087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
65.3174From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
74.5477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
60.9763From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
63.8703From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000441.3525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
46.1097From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
50.867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
37.4166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
41.3607From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
43.6258From_analysisRNASeq.briggsae.WBls:0000004.control_mean
47.1322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.76621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.27155From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.66325From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.2384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.55704From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.61177From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003513.9083From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.4158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
11.6112From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.5615From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.7071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
15.2498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.07204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004120.4519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
33.4654From_analysisRNASeq.briggsae.WBls:0000041.control_mean
35.6585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
36.73From_analysisRNASeq.briggsae.WBls:0000041.control_median
37.8015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
39.9497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
25.4501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
25.7632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
30.7108From_analysisRNASeq.briggsae.WBls:0000041.control_median
30.8458From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006317.5518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.0489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
24.4218From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.9173From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.6823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
28.9089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
25.2713From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.2998From_analysisRNASeq.briggsae.WBls:0000063.control_median
29.5187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010119.7101From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.53From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.5797From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.088From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135770
00135771
00135772
00135773
Ortholog (38)
ParalogWBGene00025978Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans hrpl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11180
Corresponding_CDS_historyCBG11180:bp194
CBG11180:bp255
Corresponding_transcriptCBG11180.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1055676
Microarray_resultsGPL8303_CB6_WBGene00032343_A
GPL8303_CB6_WBGene00032343_B
GPL14143_CBG11180_436-495_0.806_1_A
GPL14143_CBG11180_542-601_0.789_23_B
GPL14143_CBG11180_1477-1536_0.800_4_C
MethodGene