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WormBase Tree Display for Gene: WBGene00032274

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Name Class

WBGene00032274SMapS_parentSequencecb25.fpc2441
IdentityVersion2
NameCGC_nameCbr-acr-20From_analysisInferred_from_orthology
Sequence_nameCBG11088
Molecular_nameCBG11088
CBG11088.1
CBP38514
Other_nameCBG_11088Accession_evidenceNDBHE601351
Public_nameCbr-acr-20
DB_infoDatabaseNDBlocus_tagCBG_11088
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-acr-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
AlleleWBVar00012597
WBVar00012592
RNASeq_FPKMWBls:00000020.886758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.904153From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.00744From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.23141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.826293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.895455From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.962153From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.284421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.393188From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.501955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.319945From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.368774From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.353215From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.706431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.657469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.676149From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.973116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.04373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.409566From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.674352From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.61349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.01153From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.06064From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.2195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.46326From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.052847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.731694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.887168From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.889862From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.04803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.7161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.151008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.201848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.237712From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.273575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.329634From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.692106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.481592From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.482841From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.770716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.800301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.169573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.237009From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.279156From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.311361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.424954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.279274From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.295258From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.490599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.501955From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.82385From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.699269From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.84193From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135696
00135697
00135698
00135699
00135700
00135701
Contained_in_operonCBOPA0358
Ortholog (30)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acr-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11088
Corresponding_CDS_historyCBG11088:bp194
CBG11088:bp255
Corresponding_transcriptCBG11088.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1062959
Microarray_resultsGPL8303_CB6_WBGene00032274_A
GPL8303_CB6_WBGene00032274_B
GPL14143_CBG11088_860-919_0.903_8_A
MethodGene