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WormBase Tree Display for Gene: WBGene00032089

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Name Class

WBGene00032089SMapS_parentSequencecb25.fpc2374b
IdentityVersion5
NameCGC_nameCbr-his-4From_analysisInferred_from_orthology
Sequence_nameCBG10818
Molecular_nameCBG10818
CBG10818.1
CBP08677
Other_nameCBG_10818Accession_evidenceNDBHE600915
Public_nameCBG10818
DB_infoDatabaseNDBlocus_tagCBG_10818
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
208 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCbr-his-4
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
427 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameCbr-his-4
504 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-his-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhis
RNASeq_FPKMWBls:000000212.8303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.05345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.86326From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.58234From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.8468From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.1384From_analysisRNASeq.briggsae.WBls:0000002.control_mean
43.8065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000310.5411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
16.3426From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
22.1441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
12.6001From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.11514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.6309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.26689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.4489From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.2639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.94428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.75498From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
8.97219From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.37898From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.69093From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.69381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
12.5422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.5364From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.40375From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.47046From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.69366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.05938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.01588From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.32395From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.97238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.57039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004153.6621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
56.873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
59.7962From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.4417From_analysisRNASeq.briggsae.WBls:0000041.control_mean
62.7193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
68.5126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
65.616From_analysisRNASeq.briggsae.WBls:0000041.control_median
66.7741From_analysisRNASeq.briggsae.WBls:0000041.control_mean
75.2075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
83.6704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.6325From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.9747From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
60.5049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.13013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.0262From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.28353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.88132From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010115.8996From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.23959From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.8336From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.02042From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00135473
00135474
00135475
00135476
Ortholog (107)
ParalogWBGene00028219Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00038550Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00024732Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028216Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028247Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028398Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041797Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041801Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088321Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-4 and his-41.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10818
Corresponding_CDS_historyCBG10818:bp194
Corresponding_transcriptCBG10818.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1057554
Microarray_resultsGPL8303_CB6_WBGene00032089_A
GPL8303_CB6_WBGene00032089_B
GPL14143_CBG10818_7-66_0.957_1_A
Remark[191001 pad] The CGC name Cbr-his-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200204 pad] The CGC name Cbr-his-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene