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WormBase Tree Display for Gene: WBGene00031866

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Name Class

WBGene00031866SMapS_parentSequencecb25.fpc2310c
IdentityVersion1
NameSequence_nameCBG10486
Molecular_nameCBG10486
CBG10486.1
CBP16874
Other_nameCBG_10486Accession_evidenceNDBHE600935
Public_nameCBG10486
DB_infoDatabaseNDBlocus_tagCBG_10486
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (17)
RNASeq_FPKMWBls:00000021.77994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.71447From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.75072From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.75775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.15562From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.59677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.71223From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.172497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.425366From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.678234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.283577From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.137148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.395332From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.653515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.297842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.316881From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.395261From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.570918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (11)
WBls:00000270.94171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.0865From_analysisRNASeq.briggsae.WBls:0000027.control_mean
25.1819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.1358From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.60229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.86905From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.96543From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.851074From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.288469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.6319From_analysisRNASeq.briggsae.WBls:0000038.control_mean
30.7821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.40323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.72845From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.05367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000412.14138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.08132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.00298From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.42617From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.77102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.0182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.18697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
4.46032From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.50637From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.83933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.563178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.929422From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.13595From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.22252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.72546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.930841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.937937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.03694From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.77994From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.11765From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.66387From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.52002From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00061028Caenorhabditis remaneiFrom_analysisOMA
WBGene00056634Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CSP40.g13394Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g13395Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g17381Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_03388.g30024Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02752Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019950Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10486
Corresponding_CDS_historyCBG10486:bp194
Corresponding_transcriptCBG10486.1
Experimental_infoExpr_patternExpr1068622
Microarray_resultsGPL8303_CB6_WBGene00031866_A
GPL8303_CB6_WBGene00031866_B
GPL14143_CBG10486_785-844_0.888_15_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene