WormBase Tree Display for Gene: WBGene00031727

WBGene00031727 SMap: S_parent: Sequence: cb25.fpc2260b
  Identity: Version: 1
    Name: CGC_name: Cbr-nspe-7.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG10318
      Molecular_name: CBG10318
        CBG10318.1
        CBP08449
      Other_name: CBG_10318 Accession_evidence: NDB HE600918
      Public_name: CBG10318
    DB_info: Database: NDB locus_tag CBG_10318
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:01 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbr-nspe-7.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspe
    RNASeq_FPKM: WBls:0000002 0.460382 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.603381 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.34976 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.905071 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.2483 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        3.18305 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.296634 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.593269 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.197756 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (11)
      WBls:0000027 0.512583 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.53775 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.268818 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.518846 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.537635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.450323 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.995825 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.45168 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.99165 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        3.81509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.530429 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.847905 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.0148 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.18169 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.39972 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.03886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.731679 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        1.76806 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.27781 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
            RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.51898 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        2.91528 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (48)
    Paralog: WBGene00031726 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00031733 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00031729 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031730 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031731 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031732 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042849 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042850 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042851 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042852 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Is an ortholog of C. elegans nspe-5 and nspe-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG10318
    Corresponding_transcript: CBG10318.1
    Other_sequence: CJC04797_1
      CJC02323_1
      CBC10913_1
      FD516653.1
  Experimental_info: Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene