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WormBase Tree Display for Gene: WBGene00031507

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Name Class

WBGene00031507SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-best-5From_analysisInferred_from_orthology
Sequence_nameCBG10021
Molecular_nameCBG10021
CBG10021.1
CBP16693
Other_nameCBG_10021Accession_evidenceNDBHE601459
Public_nameCbr-best-5
DB_infoDatabaseNDBlocus_tagCBG_10021
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
207 Feb 2012 16:36:56WBPerson2970Name_changeCGC_nameCbr-best-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbest
RNASeq_FPKMWBls:000000214.7782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.38733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.84583From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.67045From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.89595From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.94606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.23936From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.52466From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.04932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.349773From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.123786From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.247571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.13441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.142723From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.155993From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.255263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.302203From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.858668From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.2738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.3758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
1.288From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.48795From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.10938From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.584919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.4174From_analysisRNASeq.briggsae.WBls:0000038.control_mean
26.2968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.83484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.39402From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.9532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000412.0055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.25497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.49173From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.7285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.98608From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.95537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.84193From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.32925From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.83802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.19313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.78024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.38942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.47781From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.10834From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.10628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.78797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.7866From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.09539From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.10618From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.47781From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.00623From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.60315From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.71477From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135020
Ortholog (25)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable chloride channel activity. Is an ortholog of C. elegans best-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10021
Corresponding_CDS_historyCBG10021:bp194
CBG10021:bp255
Corresponding_transcriptCBG10021.1
Other_sequenceAE01045
ES560738.1
FK805200.1
AYC00896_1
CJC17409_1
TSC11381_1
JO471058.1
Experimental_infoExpr_patternExpr1066808
Microarray_resultsGPL8303_CB6_WBGene00031507_A
GPL8303_CB6_WBGene00031507_B
GPL14143_CBG10021_1158-1217_0.950_1_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-htz-1(gu167)_upregulated
ReferenceWBPaper00040789
MethodGene