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WormBase Tree Display for Gene: WBGene00031299

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Name Class

WBGene00031299SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-hmit-1.3From_analysisInferred_from_orthology
Sequence_nameCBG09776
Molecular_nameCBG09776a
CBG09776a.1
CBP44390
CBG09776b
CBP46413
CBG09776b.1
Other_nameCBG_09776Accession_evidenceNDBHE601459
Public_nameCbr-hmit-1.3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-hmit-1.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhmit
RNASeq_FPKMWBls:000000219.793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.7817From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.1237From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.7964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.8336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
20.7873From_analysisRNASeq.briggsae.WBls:0000002.control_median
21.0512From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.218749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.34455From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.47034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.10451From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.62444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.28807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.96805From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.64802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.31021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.46113From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
4.71962From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.89067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.837855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.5271From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.27667From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
31.4667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.9307From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.0415From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.5848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003535.9311From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003832.6887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
32.7673From_analysisRNASeq.briggsae.WBls:0000038.control_mean
33.3979From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.1072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.67195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
60.6012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004112.0987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.3233From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.932From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.7242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.35716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.9331From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.0114From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.4748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.3957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006332.0383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
32.0942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
35.0116From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
39.5801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
40.6514From_analysisRNASeq.briggsae.WBls:0000063.control_mean
64.5329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
28.454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.5529From_analysisRNASeq.briggsae.WBls:0000063.control_median
38.6185From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010121.7817From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.8155From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.0599From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.1494From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134800
00134801
00134802
Ortholog (23)
Paralog (25)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans hmit-1.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09776a
CBG09776b
Corresponding_CDS_historyCBG09776:bp194
CBG09776:bp255
Corresponding_transcriptCBG09776a.1
CBG09776b.1
Other_sequence (51)
Experimental_infoExpr_patternExpr1051442
Microarray_resultsGPL8303_CB6_WBGene00031299_A
GPL14143_CBG09776_1229-1288_0.913_9_C
GPL14143_CBG09776_1496-1555_0.792_91_B
GPL14143_CBG09776_1525-1584_0.820_67_A
MethodGene