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WormBase Tree Display for Gene: WBGene00031192

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Name Class

WBGene00031192SMapS_parentSequencecb25.fpc2220c
IdentityVersion2
NameCGC_nameCbr-degt-1From_analysisInferred_from_orthology
Sequence_nameCBG09634
Molecular_nameCBG09634
CBG09634.1
CBP44967
Other_nameCBG_09634Accession_evidenceNDBHE600998
Public_nameCbr-degt-1
DB_infoDatabaseNDBlocus_tagCBG_09634
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
225 Jan 2013 14:33:12WBPerson2970Name_changeCGC_nameCbr-degt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdegt
RNASeq_FPKMWBls:00000020.176804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.270433From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.271035From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.363459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.125745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.223919From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.234261From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.053098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.135751From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.218404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.293407From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.608718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.151743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.298723From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.445704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.207399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.346655From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.346736From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.582179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.102928From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.235938From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.604886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.294369From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.298406From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.485811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.241135From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.066401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.09639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.310647From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.362501From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.524905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.762308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.040475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.063459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.067336From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.071213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.140343From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.386225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.175085From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.18808From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.278956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.288148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.196807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.254983From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.267935From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.280755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.529418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.207854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.237895From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.247128From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.241135From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.286453From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.269485From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.301016From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134675
00134676
00134677
Ortholog (27)
Paralog (27)
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans degt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09634
Corresponding_CDS_historyCBG09634:bp255
Corresponding_transcriptCBG09634.1
Other_sequenceAcan_isotig16457
Experimental_infoExpr_patternExpr1054385
Expr1057887
Microarray_resultsGPL8303_CB6_WBGene00031192_A
GPL8303_CB6_WBGene00031192_B
GPL14143_CBG09634_611-670_0.770_115_B
GPL14143_CBG09634_755-814_0.811_81_A
GPL14143_CBG09634_2454-2513_0.977_1_C
GPL14143_CBG27387_316-375_0.932_1_A
MethodGene