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WormBase Tree Display for Gene: WBGene00030669

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Name Class

WBGene00030669SMapS_parentSequencecb25.fpc2187
IdentityVersion3
NameCGC_nameCbr-rcan-1From_analysisInferred_from_orthology
Sequence_nameCBG08993
Molecular_nameCBG08993
CBG08993.1
CBP08147
Other_nameCBG_08993Accession_evidenceNDBHE601284
Cbr-rcn-1From_analysisInferred_from_orthology
Public_nameCbr-rcan-1
DB_infoDatabaseNDBlocus_tagCBG_08993
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rcn-1
303 Sep 2015 10:07:53WBPerson2970Name_changeCGC_nameCbr-rcan-1
Other_nameCbr-rcn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrcan
RNASeq_FPKMWBls:000000222.1525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
39.6199From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.7092From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
56.9981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
29.0089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
34.3591From_analysisRNASeq.briggsae.WBls:0000002.control_median
36.9672From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000326.8601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
33.5243From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
40.1885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
34.0304From_analysisRNASeq.briggsae.WBls:0000003.control_mean
35.0426From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000451.0313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
53.5067From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
55.9821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
44.2634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
49.1694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
50.7244From_analysisRNASeq.briggsae.WBls:0000004.control_mean
53.1757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.9243From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
28.8385From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.6746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
68.9167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.4205From_analysisRNASeq.briggsae.WBls:0000027.control_median
43.1253From_analysisRNASeq.briggsae.WBls:0000027.control_mean
85.9856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003538.0241From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003824.0689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
26.3531From_analysisRNASeq.briggsae.WBls:0000038.control_median
28.6374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
33.5521From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.1661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
76.3359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004116.1006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.5794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
18.8687From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.1579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
27.6348From_analysisRNASeq.briggsae.WBls:0000041.control_mean
56.7013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.905From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.7372From_analysisRNASeq.briggsae.WBls:0000041.control_mean
42.6521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
49.232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006311.6465From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.7783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.4952From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.9522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.5419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.55721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
12.2124From_analysisRNASeq.briggsae.WBls:0000063.control_median
15.4169From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.0252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010126.8601From_analysisRNASeq.briggsae.total_over_all_stages.control_median
33.2121From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.5946From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.2291From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134044
00134045
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity. Predicted to be involved in calcium-mediated signaling. Is an ortholog of C. elegans rcan-1. In C. elegans, rcan-1 is involved in several processes, including male mating behavior; positive regulation of nematode male tail tip morphogenesis; and thermosensory behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08993
Corresponding_CDS_historyCBG08993:bp194
Corresponding_transcriptCBG08993.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1065771
Microarray_resultsGPL8303_CB6_WBGene00030669_A
GPL8303_CB6_WBGene00030669_B
GPL8303_CB6_WBGene00030669_C
GPL8303_CB6_WBGene00030669_D
GPL8303_CB6_WBGene00030669_E
GPL14143_CBG08993_504-563_0.776_53_A
MethodGene