WormBase Tree Display for Gene: WBGene00030581

WBGene00030581 SMap: S_parent: Sequence: cb25.fpc2114
  Identity: Version: 2
    Name: CGC_name: Cbr-ugt-13 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08860
      Molecular_name: CBG08860
        CBG08860.1
        CBP16368
      Other_name: CBG_08860 Accession_evidence: NDB HE601187
      Public_name: Cbr-ugt-13
    DB_info: Database: NDB locus_tag CBG_08860
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:53 WBPerson2970 Name_change: CGC_name: Cbr-ugt-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ugt
    Allele: WBVar00010467
    RNASeq_FPKM: WBls:0000002 1.29571 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.58928 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.96302 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        3.00407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        2.29035 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.29667 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        3.27234 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.032744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0.059671 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.086597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.039781 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.836183 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.91621 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.996236 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        0.850822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        1.11147 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        1.19167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.68245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 21.7353 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.57152 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        53.3832 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        9.25119 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.64689 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        16.7132 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.91136 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 1.56584 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.666794 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        11.1291 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.38176 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2.33358 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.2854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        39.1824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 1.80703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.5843 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3.10894 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.13784 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.63357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        4.52644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.15812 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        3.92513 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        8.84133 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        4.79779 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        4.91421 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        5.91109 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        6.49085 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        6.67281 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.380824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        4.06163 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        5.41265 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 2.57152 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.90857 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.74474 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.03613 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00133967
    Ortholog (39)
    Paralog (79)
    Structured_description: Automated_description: Predicted to enable UDP-glycosyltransferase activity. Is an ortholog of C. elegans ugt-13. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08860
    Corresponding_CDS_history: CBG08860:bp194
      CBG08860:bp255
    Corresponding_transcript: CBG08860.1
    Other_sequence: Oden_isotig20368
      Dviv_isotig05003
      CSC01018_1
      Acan_isotig18804
      Dviv_isotig05005
      FD517098.1
      EX555668.1
      Dviv_isotig05004
      Name_isotig01078
  Experimental_info: Expr_pattern: Expr1057497
    Microarray_results: GPL8303_CB6_WBGene00030581_A
      GPL14143_CBG08860_1202-1261_0.929_6_A
      GPL14143_CBG08860_1232-1291_0.922_8_B
  Method: Gene