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WormBase Tree Display for Gene: WBGene00030532

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Name Class

WBGene00030532SMapS_parentSequencecb25.fpc2114
IdentityVersion1
NameSequence_nameCBG08803
Molecular_nameCBG08803
CBG08803.1
CBP02179
Other_nameCBG_08803Accession_evidenceNDBHE601187
Public_nameCBG08803
DB_infoDatabaseNDBlocus_tagCBG_08803
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000222.7527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.946From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
32.186From_analysisRNASeq.briggsae.WBls:0000002.control_mean
48.8593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
19.4003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
23.8493From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.9896From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000037.09339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
7.11215From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.13091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.46782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
6.56404From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000432.428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
34.74From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
37.052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.9362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
28.1952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.0134From_analysisRNASeq.briggsae.WBls:0000004.control_mean
39.4557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.694From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.82709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.88409From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
30.3708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
101.969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
16.6275From_analysisRNASeq.briggsae.WBls:0000027.control_median
34.2627From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003560.9689From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.9571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
45.8542From_analysisRNASeq.briggsae.WBls:0000038.control_mean
47.0426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
52.5559From_analysisRNASeq.briggsae.WBls:0000038.control_median
58.0691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
64.348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.0259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.13733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.0178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.01784From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.29973From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.01788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.93767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.19741From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.37702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.75227From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006315.1496From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.1106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.0262From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
19.877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.1898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
14.8229From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.5684From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010122.734From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.0757From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.3055From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.9243From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133912
Ortholog (25)
ParalogWBGene00031548Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans F39G3.5. In C. elegans, F39G3.5 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08803
Corresponding_CDS_historyCBG08803:bp194
Corresponding_transcriptCBG08803.1
Experimental_infoExpr_patternExpr1063355
Microarray_resultsGPL8303_CB6_WBGene00030532_A
GPL8303_CB6_WBGene00030532_B
GPL8303_CB6_WBGene00030532_C
GPL8303_CB6_WBGene00030532_D
GPL8303_CB6_WBGene00030532_E
GPL14143_CBG08803_100-159_0.907_6_C
GPL14143_CBG08803_298-357_0.805_45_B
GPL14143_CBG08803_403-462_0.841_34_A
MethodGene