WormBase Tree Display for Gene: WBGene00030386

WBGene00030386 SMap: S_parent: Sequence: cb25.fpc2051
  Identity: Version: 2
    Name: CGC_name: Cbr-ncx-10 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08629
      Molecular_name: CBG08629
        CBG08629.1
        CBP39839
      Other_name: CBG_08629 Accession_evidence: NDB HE601197
      Public_name: Cbr-ncx-10
    DB_info: Database: NDB locus_tag CBG_08629
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ncx-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ncx
    Allele: WBVar00113863
      WBVar00113864
      WBVar00113865
      WBVar00113860
      WBVar00113861
      WBVar00113862
    RNASeq_FPKM: WBls:0000002 0.124182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.407184 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.46912 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.628251 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.094894 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.296651 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.329112 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.149316 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.15901 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.168705 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.106007 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.044951 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.089902 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.103145 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.142465 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.226429 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.292846 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.049337 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.105906 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.12262 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.145761 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.13419 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.302386 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.891826 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.853707 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.047019 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.98202 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.24366 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.4453 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.90858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        2.03703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.149695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.171858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.206878 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.241899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.414183 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.09328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.584391 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.593175 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.926882 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.975434 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.15114 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.198965 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.277523 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.374354 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.24414 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.238244 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.451872 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.839462 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.171858 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.743547 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.212697 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.681942 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00133773
      00133774
    Ortholog (36)
    Paralog: WBGene00031502 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00030393 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00030394 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00031503 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans ncx-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08629
    Corresponding_CDS_history: CBG08629:bp194
      CBG08629:bp255
    Corresponding_transcript: CBG08629.1
  Experimental_info: Expr_pattern: Expr1068993
    Microarray_results: GPL8303_CB6_WBGene00030386_A
      GPL8303_CB6_WBGene00030386_B
      GPL14143_CBG08629_1543-1602_0.907_14_B
      GPL14143_CBG08629_1644-1703_0.933_6_C
      GPL14143_CBG08629_1769-1828_0.948_1_A
  Method: Gene