WormBase Tree Display for Gene: WBGene00030385

WBGene00030385 SMap: S_parent: Sequence: cb25.fpc2051
  Identity: Version: 2
    Name: CGC_name: Cbr-srsx-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08628
      Molecular_name: CBG08628
        CBG08628.1
        CBP08037
      Other_name: CBG_08628 Accession_evidence: NDB HE601197
      Public_name: Cbr-srsx-3
    DB_info: Database: NDB locus_tag CBG_08628
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-srsx-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srsx
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
            RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.179198 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.358396 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.119465 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.330429 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.660859 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.243385 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.252613 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.35882 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 0.205939 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.243634 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.246604 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.250519 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.257404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.279437 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.428363 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.085216 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.255648 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.063369 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.095596 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.126738 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.053078 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.104453 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.114681 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.208906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.249817 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.066652 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.074243 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.108151 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.11847 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.142059 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.190926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.166493 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.266821 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.345557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.78149 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
            RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.014537 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.087222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.111965 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.059865 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.136585 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00133770
      00133771
      00133772
    Ortholog (27)
    Paralog: WBGene00028695 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00028842 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00030387 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00039042 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00030392 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00030388 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00030389 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00030391 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00088421 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00088422 Caenorhabditis briggsae From_analysis: Inparanoid_8
    Structured_description: Automated_description: Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans srsx-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08628
    Corresponding_CDS_history: CBG08628:bp194
    Corresponding_transcript: CBG08628.1
    Other_sequence: Tcir_isotig07821
  Experimental_info: Expr_pattern: Expr1059462
    Microarray_results: GPL8303_CB6_WBGene00030385_A
      GPL14143_CBG08628_351-410_0.588_135_B
      GPL14143_CBG08628_470-529_0.943_3_C
      GPL14143_CBG08628_815-874_0.950_1_A
  Method: Gene