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WormBase Tree Display for Gene: WBGene00030383

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Name Class

WBGene00030383SMapS_parentSequencecb25.fpc2051
IdentityVersion2
NameCGC_nameCbr-srt-53From_analysisInferred_from_orthology
Sequence_nameCBG08624
Molecular_nameCBG08624a
CBG08624a.1
CBP28267
CBG08624b
CBP40305
CBG08624b.1
Other_nameCBG_08624Accession_evidenceNDBHE601197
Public_nameCbr-srt-53
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-srt-53
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrt
AlleleWBVar00113851
WBVar00113857
WBVar00113852
WBVar00113858
WBVar00113853
WBVar00113859
WBVar00113854
WBVar00113855
WBVar00113856
RNASeq_FPKMWBls:00000020.350694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.443262From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.573443From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.926374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.091366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.396978From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.452924From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.171942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.290774From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.409605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.260139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.280096From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.344169From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.599065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.112742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.281412From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.979371From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.54396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.964786From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.14657From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.64816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.50412From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.181571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.60923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.17639From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.42395From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.74355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.16146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.09065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.110406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.120117From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.129827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.216273From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.534207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.25888From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.304114From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.387934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.571659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.143979From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.246827From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.385174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.70498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.243789From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.262955From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.343599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.385174From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.70659From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.367934From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.649292From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (80)
Paralog (52)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: 7TM GPCR, serpentine receptor class t (Srt) and Serpentine type 7TM GPCR chemoreceptor Srt. Is an ortholog of C. elegans srt-53.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08624a
CBG08624b
Corresponding_CDS_historyCBG08624:bp194
Corresponding_transcriptCBG08624a.1
CBG08624b.1
Experimental_infoExpr_patternExpr1069042
Microarray_resultsGPL14143_CBG08624_412-471_0.876_42_B
GPL14143_CBG08624_553-612_0.917_14_A
GPL14143_CBG08624_746-805_0.856_54_C
MethodGene