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WormBase Tree Display for Gene: WBGene00030324

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Name Class

WBGene00030324SMapS_parentSequencecb25.fpc2051
IdentityVersion1
NameSequence_nameCBG08559
Molecular_nameCBG08559
CBG08559.1
CBP16287
Other_nameCBG_08559Accession_evidenceNDBHE601197
Public_nameCBG08559
DB_infoDatabaseNDBlocus_tagCBG_08559
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00113749
WBVar00113750
WBVar00113745
WBVar00113751
WBVar00113746
WBVar00113752
WBVar00113747
WBVar00113748
RNASeq_FPKMWBls:00000024.43589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.59832From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.627From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.84678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.62049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.51711From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.87537From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000316.1317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
17.725From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
19.3184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
20.2459From_analysisRNASeq.briggsae.WBls:0000003.control_mean
25.2875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000049.36163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.58467From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.8077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.0536From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.0573From_analysisRNASeq.briggsae.WBls:0000004.control_mean
10.3367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
10.7267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.0144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.85454From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.47685From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.5616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.63994From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.96397From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.42533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.25532From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.15334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.27958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.00695From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.23259From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.18561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.40928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000417.00116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.34857From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.40332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.43259From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.46187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.52792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.50921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.40377From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.51912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.2743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.3704From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.67698From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.92321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.97749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.78776From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.8001From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.87458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.97749From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.51075From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.6919From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.2675From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (24)
ParalogWBGene00040783Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040784Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD40/YVTN repeat-like-containing domain superfamily; WD domain, G-beta repeat; WD40 repeat; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans R11D1.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08559
Corresponding_CDS_historyCBG08559:bp194
CBG08559:bp255
Corresponding_transcriptCBG08559.1
Experimental_infoExpr_patternExpr1052815
Microarray_resultsGPL8303_CB6_WBGene00030323_A
GPL8303_CB6_WBGene00030323_B
GPL8303_CB6_WBGene00030324_A
GPL8303_CB6_WBGene00030324_B
GPL14143_CBG08559_220-279_0.810_108_C
GPL14143_CBG08559_372-431_0.827_86_B
GPL14143_CBG08559_1209-1268_0.888_32_A
MethodGene