Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00030313

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00030313SMapS_parentSequencecb25.fpc2051
IdentityVersion3
NameCGC_nameCbr-lin-25From_analysisInferred_from_orthology
Sequence_nameCBG08546
Molecular_nameCBG08546
CBG08546.1
CBP02128
Other_nameCBG_08546Accession_evidenceNDBHE601197
Public_nameCbr-lin-25
DB_infoDatabaseNDBlocus_tagCBG_08546
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-25
313 Nov 2007 13:51:25WBPerson2970EventAcquires_mergeWBGene00000337
Acquires_mergeWBGene00000337
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000000213.8609From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.0197From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
18.8237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.73926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.9632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
13.4915From_analysisRNASeq.briggsae.WBls:0000002.control_median
13.6365From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000342.286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
47.0326From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
51.7792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
29.6444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
41.2365From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000430.6616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
33.2192From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.7769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
30.7459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.1614From_analysisRNASeq.briggsae.WBls:0000004.control_mean
33.4493From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
35.1733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.770323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.0187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.7956From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.52821From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.3785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.08705From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.74078From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003510.8747From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8107From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.8451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.7019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.16886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.62304From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.77629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.9574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
24.5359From_analysisRNASeq.briggsae.WBls:0000041.control_mean
26.4842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
28.1465From_analysisRNASeq.briggsae.WBls:0000041.control_median
29.8088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.8933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
11.769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.7649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
20.6245From_analysisRNASeq.briggsae.WBls:0000041.control_median
20.7796From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006310.3113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.22447From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.25206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.49526From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.06374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
12.2318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.05903From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.7795From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.9574From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.699From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.9782From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.0103From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans lin-25. In C. elegans, lin-25 is involved in defense response to Gram-positive bacterium and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08546
Corresponding_CDS_historyCBG08546:bp194
CBG08546:bp205
Corresponding_transcriptCBG08546.1
Other_sequenceCBC04828_1
CJC16777
Experimental_infoExpr_patternExpr1063276
Microarray_resultsGPL8303_CB6_WBGene00030313_A
GPL8303_CB6_WBGene00030313_B
GPL14143_CBG08546_2312-2371_0.608_416_C
GPL14143_CBG08546_2603-2662_0.887_34_B
GPL14143_CBG08546_3394-3453_0.976_1_A
MethodGene