WormBase Tree Display for Gene: WBGene00030018

WBGene00030018 SMap: S_parent: Sequence: cb25.fpc1402c
  Identity: Version: 2
    Name: CGC_name: Cbr-col-19 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08166
      Molecular_name: CBG08166
        CBG08166.1
        CBP07841
      Other_name: CBG_08166 Accession_evidence: NDB HE600971
      Public_name: Cbr-col-19
    DB_info: Database: NDB locus_tag CBG_08166
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-col-19
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 180.082 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        188.488 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        332.615 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        52.766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        168.141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        174.111 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        183.401 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.134836 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.269672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.089891 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.049664 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.248322 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1.10637 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.62331 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.19138 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.84445 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        11.2508 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.73388 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        38.4292 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 9.31364 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.1479 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        27.0641 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        31.5478 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        3.18015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        43.9802 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        68.8828 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 1200.06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1238.99 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1305.92 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1411.77 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1781.38 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        562.764 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1004.92 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1037.88 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        197.86 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        875.697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        453.783 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        553.584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        563.383 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        571.149 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        580.8 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1906.66 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        567.266 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        695.929 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 10.1479 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        274.485 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        11.7097 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        293.345 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00133437
    Ortholog (42)
    Paralog (155)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-19. In C. elegans, col-19 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08166
    Corresponding_CDS_history: CBG08166:bp194
    Corresponding_transcript: CBG08166.1
    Other_sequence (36)
  Experimental_info: Expr_pattern: Expr1059756
    Microarray_results: GPL8303_CB6_WBGene00030018_A
      GPL8303_CB6_WBGene00030018_B
      GPL14143_CBG08166_171-230_0.690_16_C
      GPL14143_CBG08166_685-744_0.837_1_A
      GPL14143_CBG08166_740-799_0.670_19_B
  Method: Gene