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WormBase Tree Display for Gene: WBGene00029819

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Name Class

WBGene00029819SMapS_parentSequencecb25.fpc1402b
IdentityVersion2
NameCGC_nameCbr-ptr-17From_analysisInferred_from_orthology
Sequence_nameCBG07932
Molecular_nameCBG07932
CBG07932.1
CBP47908
Other_nameCBG_07932Accession_evidenceNDBHE600996
Public_nameCbr-ptr-17
DB_infoDatabaseNDBlocus_tagCBG_07932
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-ptr-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classptr
Allele (14)
RNASeq_FPKMWBls:00000020.778288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.879045From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.895704From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.963143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.271866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.72725From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.836996From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.58247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.90718From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.23188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
4.72929From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.37353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.54883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
3.92725From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.30567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.45103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.4679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.766From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.05656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (11)
WBls:00000270.087686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.782369From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.2073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.35912From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.59473From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.4071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.62111From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.54987From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.240466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.269188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.51445From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.60453From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.75972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.14876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.16408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.202082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.32078From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.439478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.50187From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.20184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.624406From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.628757From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.809333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.955726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.132955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.217208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.284548From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.35739From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.357654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.794583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.026325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.250878From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.302212From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.775846From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.63907From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.788476From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.82506From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133201
Contained_in_operonCBOPA0168
Ortholog (39)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans ptr-17.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07932
Corresponding_CDS_historyCBG07932:bp194
CBG07932:bp257
Corresponding_transcriptCBG07932.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1066003
Microarray_resultsGPL8303_CB6_WBGene00029819_A
GPL8303_CB6_WBGene00029819_B
GPL14143_CBG07932_1997-2056_0.693_218_C
GPL14143_CBG07932_2016-2075_0.562_361_B
GPL14143_CBG07932_2148-2207_0.932_1_A
MethodGene