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WormBase Tree Display for Gene: WBGene00029655

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Name Class

WBGene00029655SMapS_parentSequencecb25.fpc0829
IdentityVersion3
NameCGC_nameCbr-nfki-1From_analysisInferred_from_orthology
Sequence_nameCBG07688
Molecular_nameCBG07688
CBG07688.1
CBP34781
Other_nameCBG_07688Accession_evidenceNDBHE601041
Cbr-nbid-1From_analysisInferred_from_orthology
Public_nameCbr-nfki-1
DB_infoDatabaseNDBlocus_tagCBG_07688
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
229 Apr 2015 12:22:06WBPerson2970Name_changeCGC_nameCbr-nbid-1
302 Oct 2015 11:52:03WBPerson2970Name_changeCGC_nameCbr-nfki-1
Other_nameCbr-nbid-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnfki
AlleleWBVar00008607
WBVar00112738
WBVar00019649
WBVar00008602
RNASeq_FPKMWBls:000000234.7993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
40.1005From_analysisRNASeq.briggsae.WBls:0000002.control_mean
42.2833From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
43.2189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
16.5332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
34.2087From_analysisRNASeq.briggsae.WBls:0000002.control_mean
38.5413From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.5754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.56897From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.56255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.22999From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.45598From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.1362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.1597From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.1832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
10.6846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.1851From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.3838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.5378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.3697From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.2764From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.47701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
57.9826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
33.5498From_analysisRNASeq.briggsae.WBls:0000027.control_mean
35.6762From_analysisRNASeq.briggsae.WBls:0000027.control_median
58.3699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003564.0621From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.2667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
39.0511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
43.0318From_analysisRNASeq.briggsae.WBls:0000038.control_median
45.6221From_analysisRNASeq.briggsae.WBls:0000038.control_mean
47.0126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
83.1579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004112.4541From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.3202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.74707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.8674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.87463From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.88185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.1984From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.2097From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.5149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
29.9271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.05277From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.74506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.71959From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.76219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.03702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.4121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.74089From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.94599From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010113.2667From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.4973From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.3182From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.5793From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133049
00133050
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nfki-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07688
Corresponding_CDS_historyCBG07688:bp194
Corresponding_transcriptCBG07688.1
Other_sequenceACC04842_1
Acan_isotig06110
CBC00938_1
Experimental_infoExpr_patternExpr1052942
Microarray_resultsGPL8303_CB6_WBGene00029655_A
GPL8303_CB6_WBGene00029655_B
GPL14143_CBG07688_1488-1547_0.810_1_B
GPL14143_CBG07688_1596-1655_0.777_24_C
GPL14143_CBG07688_1663-1722_0.733_59_A
MethodGene