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WormBase Tree Display for Gene: WBGene00029643

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Name Class

WBGene00029643SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG07669
Molecular_nameCBG07669
CBG07669.1
CBP48123
Other_nameCBG_07669Accession_evidenceNDBHE601041
Public_nameCBG07669
DB_infoDatabaseNDBlocus_tagCBG_07669
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.06201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.32119From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.66044From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.59813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.3699From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.41862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.59999From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.03718From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.074361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.024787From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.162933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.19255From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.222168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.148441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.212085From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.215695From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.311187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.520281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.2253From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.77345From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.57478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.40004From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.65618From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.30437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.63243From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.426307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.22402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.71175From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.30845From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.39289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.80377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.31962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.553337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.626152From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.698966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.866496From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.89406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.635447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.667207From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.77834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.813295From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000631.45468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.51324From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.56552From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.95733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.58869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.12926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.44925From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.5101From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.32119From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.83316From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.09564From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.6606From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133031
Ortholog (12)
ParalogWBGene00033348Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable microtubule binding activity. Is an ortholog of C. elegans H03A11.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07669
Corresponding_CDS_historyCBG07669:bp194
CBG07669:bp258
Corresponding_transcriptCBG07669.1
Other_sequenceTcir_isotig14168
Experimental_infoExpr_patternExpr1057477
Microarray_resultsGPL8303_CB6_WBGene00029643_A
GPL14143_CBG07669_4804-4863_0.813_5_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene