Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00029623

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00029623SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG07646
Molecular_nameCBG07646
CBG07646.1
CBP07710
Other_nameCBG_07646Accession_evidenceNDBHE601041
Public_nameCBG07646
DB_infoDatabaseNDBlocus_tagCBG_07646
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00112669
WBVar00112670
WBVar00112664
WBVar00112665
WBVar00112671
WBVar00112672
WBVar00112666
WBVar00112667
WBVar00112668
RNASeq_FPKMWBls:000000210.4083From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.4743From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.9724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.77814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.1262From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.04962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.31861From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.3782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
13.6452From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
13.9121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.5819From_analysisRNASeq.briggsae.WBls:0000003.control_mean
7.45525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000425.236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.8625From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.9129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
28.1686From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.292From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.6533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.731357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.99851From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
22.6758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.46856From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.94858From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.89865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.32608From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003513.7407From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.7832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.2092From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.6351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.7519From_analysisRNASeq.briggsae.WBls:0000038.control_mean
26.7772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.81202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.9194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.26209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.74207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.28707From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.83207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.93891From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.0937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.51406From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.53354From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.84294From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.15925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.28971From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.59516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.1706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.26154From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.94243From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.3545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.9194From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.7813From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.284From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.5389From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00025270Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029690Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Endoplasmic reticulum vesicle transporter, N-terminal; Endoplasmic reticulum vesicle transporter, C-terminal; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); and Endoplasmic reticulum vesicle transporter. Is an ortholog of C. elegans ergi-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07646
Corresponding_CDS_historyCBG07646:bp194
Corresponding_transcriptCBG07646.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1068219
Microarray_resultsGPL8303_CB6_WBGene00029623_A
GPL8303_CB6_WBGene00029623_B
GPL14143_CBG07646_905-964_0.824_7_B
GPL14143_CBG07646_1007-1066_0.833_3_C
GPL14143_CBG07646_1118-1177_0.827_5_A
MethodGene