WormBase Tree Display for Gene: WBGene00029568

WBGene00029568 SMap: S_parent: Sequence: cb25.fpc0829
  Identity: Version: 2
    Name: CGC_name: Cbr-csq-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG07571
      Molecular_name: CBG07571
        CBG07571.1
        CBP07686
      Other_name: CBG_07571 Accession_evidence: NDB HE601041
      Public_name: Cbr-csq-1
    DB_info: Database: NDB locus_tag CBG_07571
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-csq-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: csq
    Allele: WBVar00112573
      WBVar00112572
    RNASeq_FPKM: WBls:0000002 101.816 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        110.466 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        136.444 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        197.05 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        106.141 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        120.579 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        72.9854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        3.88997 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        7.77993 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        5.37921 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        8.3577 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 46.9304 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        53.5872 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        60.244 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        45.1369 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        50.326 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        51.7452 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        56.0888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 26.528 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        38.5603 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        80.6141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.53871 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        105.868 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        53.571 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        55.3872 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 107.244 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 111.811 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        124.658 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        138.306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        205.087 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        69.9223 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        85.3153 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 123.594 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        251.349 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        59.9962 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        88.6709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        91.5154 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        94.36 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        118.238 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        139.426 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        142.116 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        200.066 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        60.5394 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        72.0212 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        73.4106 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        75.3085 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        81.9568 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        101.12 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        67.3028 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        74.3596 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 80.6141 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        84.2963 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        77.9613 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        84.912 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132945
    Ortholog (28)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans csq-1. In C. elegans, csq-1 is involved in calcium ion homeostasis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG07571
    Corresponding_CDS_history: CBG07571:bp194
    Corresponding_transcript: CBG07571.1
    Other_sequence (81)
  Experimental_info: Expr_pattern: Expr1055869
    Microarray_results: GPL8303_CB6_WBGene00029568_A
      GPL8303_CB6_WBGene00029568_B
      GPL14143_CBG07571_656-715_0.502_141_B
      GPL14143_CBG07571_738-797_0.799_14_C
      GPL14143_CBG07571_1070-1129_0.836_5_A
  Method: Gene