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WormBase Tree Display for Gene: WBGene00029487

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Name Class

WBGene00029487SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG07432
Molecular_nameCBG07432
CBG07432.1
CBP44401
Other_nameCBG_07432Accession_evidenceNDBHE601041
Public_nameCBG07432
DB_infoDatabaseNDBlocus_tagCBG_07432
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000210.5821From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.6227From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.9699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.31612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.1876From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.88241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.44911From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000314.205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
20.3393From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
26.4735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.7174From_analysisRNASeq.briggsae.WBls:0000003.control_mean
9.47374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000437.6723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
42.87From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
48.0677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
38.8061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
43.3827From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
45.0455From_analysisRNASeq.briggsae.WBls:0000004.control_mean
57.2986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.10703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
13.1412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.60668From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.6183From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.03099From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.57756From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.45531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003511.4503From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7777From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.6033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.7664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.52346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.96133From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.95216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000416.44571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.64801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.22194From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.54389From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.79587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.28599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.0502From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.4993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.54093From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.62656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.75677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.8978From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.65888From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.29024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.34958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.91841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.05693From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.21606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.3803From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.95216From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.9387From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.78936From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Concanavalin A-like lectin/glucanase domain superfamily; SPRY domain; B30.2/SPRY domain superfamily; and SPRY domain-containing protein 7. Is an ortholog of C. elegans F18H3.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07432
Corresponding_CDS_historyCBG07432:bp194
CBG07432:bp255
Corresponding_transcriptCBG07432.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1062771
Microarray_resultsGPL8303_CB6_WBGene00029487_A
GPL14143_CBG07432_158-217_0.881_2_C
GPL14143_CBG07432_442-501_0.825_22_A
GPL14143_CBG07432_556-615_0.867_7_B
MethodGene