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WormBase Tree Display for Gene: WBGene00029468

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Name Class

WBGene00029468SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG07411
Molecular_nameCBG07411
CBG07411.1
CBP07618
Other_nameCBG_07411Accession_evidenceNDBHE601041
Public_nameCBG07411
DB_infoDatabaseNDBlocus_tagCBG_07411
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00136691
WBVar00136692
RNASeq_FPKMWBls:000000210.1046From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.9168From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.6099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.03586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.654From_analysisRNASeq.briggsae.WBls:0000002.control_median
11.2034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
13.9884From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.9366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
11.016From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.0954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.0187From_analysisRNASeq.briggsae.WBls:0000003.control_mean
11.0242From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000418.0932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
18.2526From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
18.4119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.1644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
17.1896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.976From_analysisRNASeq.briggsae.WBls:0000004.control_mean
21.0209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.606467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.4924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.73214From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.94367From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.6402From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.1123From_analysisRNASeq.briggsae.WBls:0000027.control_median
23.7297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.4757From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.5021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.4025From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.31949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
26.8754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.2422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.6429From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.6165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.49026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.22274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.73247From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.4293From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.1912From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.1668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
25.4089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.69985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.72893From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.52967From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.54313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.87201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.5364From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.66534From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.3474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.9366From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.0721From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.8527From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.9302From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (22)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, RING-type; Zinc finger, RING/FYVE/PHD-type; and Zinc finger, C3HC4 type (RING finger). Is an ortholog of C. elegans F54B11.5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07411
Corresponding_CDS_historyCBG07411:bp194
Corresponding_transcriptCBG07411.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1067860
Microarray_resultsGPL8303_CB6_WBGene00029468_A
GPL8303_CB6_WBGene00029468_B
GPL14143_CBG07411_265-324_0.842_15_C
GPL14143_CBG07411_294-353_0.846_14_A
GPL14143_CBG07411_475-534_0.883_2_B
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene