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WormBase Tree Display for Gene: WBGene00029403

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Name Class

WBGene00029403SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameCGC_nameCbr-cytb-5.1From_analysisInferred_from_orthology
Sequence_nameCBG07320
Molecular_nameCBG07320
CBG07320.1
CBP07768
Other_nameCBG_07320Accession_evidenceNDBHE601041
Public_nameCbr-cytb-5.1
DB_infoDatabaseNDBlocus_tagCBG_07320
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
230 Sep 2011 16:49:20WBPerson2970Name_changeCGC_nameCbr-cytb-5.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcytb
RNASeq_FPKMWBls:0000002191.687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
267.345From_analysisRNASeq.briggsae.WBls:0000002.control_mean
273.029From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
337.318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
225.844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
249.436From_analysisRNASeq.briggsae.WBls:0000002.control_median
256.97From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000332.8571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
33.7509From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
34.6448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
21.3461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
29.616From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004154.64From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
159.618From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
164.596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
133.506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
155.05From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
159.167From_analysisRNASeq.briggsae.WBls:0000004.control_mean
188.041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002717.4044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
202.688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
49.463From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
89.8518From_analysisRNASeq.briggsae.WBls:0000027.control_mean
107.558From_analysisRNASeq.briggsae.WBls:0000027.control_median
108.802From_analysisRNASeq.briggsae.WBls:0000027.control_mean
165.653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035350.035From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038110.897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
282.051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
345.615From_analysisRNASeq.briggsae.WBls:0000038.control_mean
353.445From_analysisRNASeq.briggsae.WBls:0000038.control_median
424.839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
564.674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041105.951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
113.147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
141.262From_analysisRNASeq.briggsae.WBls:0000041.control_median
144.693From_analysisRNASeq.briggsae.WBls:0000041.control_mean
169.376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
190.297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
150.85From_analysisRNASeq.briggsae.WBls:0000041.control_mean
151.29From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
160.333From_analysisRNASeq.briggsae.WBls:0000041.control_median
175.04From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063187.063From_analysisRNASeq.briggsae.WBls:0000063.control_mean
198.97From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
201.5From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
257.406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
277.441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
167.457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
183.796From_analysisRNASeq.briggsae.WBls:0000063.control_mean
200.235From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101198.97From_analysisRNASeq.briggsae.total_over_all_stages.control_median
213.704From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
181.54From_analysisRNASeq.briggsae.total_over_all_stages.control_median
199.49From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00026794Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029066Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031270Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00303154Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cytochrome b5-like heme/steroid binding domain; Cytochrome b5-like Heme/Steroid binding domain; and Cytochrome b5-like heme/steroid binding domain superfamily. Is an ortholog of C. elegans cytb-5.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07320
Corresponding_CDS_historyCBG07320:bp194
Corresponding_transcriptCBG07320.1
Other_sequence (94)
Experimental_infoExpr_patternExpr1066829
Microarray_resultsGPL8303_CB6_WBGene00029403_A
GPL8303_CB6_WBGene00029403_B
GPL14143_CBG07320_49-108_0.902_6_B
GPL14143_CBG07320_231-290_0.916_2_A
GPL14143_CBG07320_352-411_0.682_44_C
MethodGene