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WormBase Tree Display for Gene: WBGene00029358

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Name Class

WBGene00029358SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG07243
Molecular_nameCBG07243
CBG07243.1
CBP35155
Other_nameCBG_07243Accession_evidenceNDBHE601041
Public_nameCBG07243
DB_infoDatabaseNDBlocus_tagCBG_07243
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000022.07522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.40822From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.46029From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.89742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.45183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.20817From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.24172From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000034.96871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
7.08982From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.21092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.94468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
6.37477From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.1218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
23.9783From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
24.8348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
17.9929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
19.9392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
22.3789From_analysisRNASeq.briggsae.WBls:0000004.control_mean
26.0056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.559953From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.38512From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.5954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.07456From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.68613From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.58916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.35037From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.914309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.10031From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.28631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.0153From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.86059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.38958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.5289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.57083From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.61277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.90933From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.10608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.89357From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.14017From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.17436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.02933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.695067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.946695From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.00923From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.53565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.86875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.627528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.820881From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.945615From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.86875From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.92963From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.26237From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.09773From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (22)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: TLR4 regulator and MIR-interacting MSAP and Domain of unknown function DUF3456. Is an ortholog of C. elegans C11H1.7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07243
Corresponding_CDS_historyCBG07243:bp194
Corresponding_transcriptCBG07243.1
Other_sequenceDviv_isotig19762
Experimental_infoExpr_patternExpr1054398
Microarray_resultsGPL8303_CB6_WBGene00029358_A
GPL8303_CB6_WBGene00029358_B
GPL8303_CB6_WBGene00029358_C
GPL8303_CB6_WBGene00029358_D
GPL8303_CB6_WBGene00029358_E
GPL14143_CBG07243_326-385_0.658_36_B
GPL14143_CBG07243_409-468_0.888_1_A
GPL14143_CBG07243_458-517_0.767_14_C
MethodGene