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WormBase Tree Display for Gene: WBGene00029201

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Name Class

WBGene00029201SMapS_parentSequencecb25.fpc0305a
IdentityVersion2
NameCGC_nameCbr-cat-2From_analysisInferred_from_orthology
Sequence_nameCBG07026
Molecular_nameCBG07026
CBG07026.1
CBP21828
Other_nameCBG_07026Accession_evidenceNDBHE600960
Public_nameCbr-cat-2
DB_infoDatabaseNDBlocus_tagCBG_07026
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cat-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcat
RNASeq_FPKMWBls:00000020.142279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.772543From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.0058From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.16955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.381938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.674892From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.693869From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.42052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.424203From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.427887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.719199From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.30919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.826172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.27436From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.72255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.839918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.1774From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.19812From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.42457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (11)
WBls:00000270.251536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.564506From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.860921From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.76672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.780595From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.894862From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.996685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.25223From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.378653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.773112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.923196From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.07328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.14564From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.35752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.262755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.263542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.303937From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.344332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.17399From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.82533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.950361From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.38337From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.55639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.04784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.212389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.228999From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.283929From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.43377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.544487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.327212From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.331385From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.543626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.564506From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.818721From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.799642From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.895275From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132653
00132654
00132655
00132656
Ortholog (31)
ParalogWBGene00026084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033840Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable iron ion binding activity and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen. Predicted to be involved in aromatic amino acid metabolic process. Is an ortholog of C. elegans cat-2. In C. elegans, cat-2 is involved in several processes, including cellular response to amphetamine; dopamine biosynthetic process from tyrosine; and male mating behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07026
Corresponding_CDS_historyCBG07026:bp194
Corresponding_transcriptCBG07026.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1070147
Microarray_resultsGPL8303_CB6_WBGene00029201_A
GPL8303_CB6_WBGene00029201_B
GPL14143_CBG07026_543-602_0.812_2_C
GPL14143_CBG07026_833-892_0.710_111_B
GPL14143_CBG07026_1318-1377_0.803_5_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene