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WormBase Tree Display for Gene: WBGene00029120

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Name Class

WBGene00029120SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-dos-1From_analysisInferred_from_orthology
Sequence_nameCBG06935
Molecular_nameCBG06935
CBG06935.1
CBP42173
Other_nameCBG_06935Accession_evidenceNDBHE601347
Public_nameCbr-dos-1
DB_infoDatabaseNDBlocus_tagCBG_06935
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:49WBPerson2970Name_changeCGC_nameCbr-dos-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdos
RNASeq_FPKMWBls:000000211.864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.2267From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.9382From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.7238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.6232From_analysisRNASeq.briggsae.WBls:0000002.control_median
13.9586From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.0197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.897278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.42675From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.95623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.52521From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.72211From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.11303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.21909From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.32516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.755451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.984758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.06055From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.12436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002714.9119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.56043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.22672From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.56635From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.6473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.06931From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.33659From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003530.9464From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.6626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
23.2759From_analysisRNASeq.briggsae.WBls:0000038.control_median
28.8893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
29.6288From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.86692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
68.0964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.2844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.8593From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.7569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.04432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.35173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.81806From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.6592From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.0339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
13.4838From_analysisRNASeq.briggsae.WBls:0000041.control_mean
18.4315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006320.4251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
20.6356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
25.9275From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
27.2274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
28.4941From_analysisRNASeq.briggsae.WBls:0000063.control_mean
48.255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
23.2815From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.1053From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.5343From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.3004From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.7841From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.9366From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (16)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans dos-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06935
Corresponding_CDS_historyCBG06935:bp194
CBG06935:bp255
Corresponding_transcriptCBG06935.1
Other_sequenceCJC05627_1
CGC01356_1
Experimental_infoExpr_patternExpr1059655
Microarray_resultsGPL8303_CB6_WBGene00029120_A
GPL8303_CB6_WBGene00029120_B
GPL14143_CBG06935_129-188_0.876_20_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene