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WormBase Tree Display for Gene: WBGene00029022

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Name Class

WBGene00029022SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-glp-1From_analysisInferred_from_orthology
Sequence_nameCBG06809
Molecular_nameCBG06809
CBG06809.1
CBP07475
Other_nameCBG_06809Accession_evidenceNDBHE601347
Public_nameCbr-glp-1
DB_infoDatabaseNDBlocus_tagCBG_06809
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-glp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglp
AlleleWBVar00111769
WBVar00111770
WBVar00111771
WBVar00111772
WBVar00021494
RNASeq_FPKMWBls:000000230.8392From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.805From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
49.8619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.8507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
35.1539From_analysisRNASeq.briggsae.WBls:0000002.control_mean
40.9514From_analysisRNASeq.briggsae.WBls:0000002.control_median
48.0978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003111.418From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
130.385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
92.4502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
115.772From_analysisRNASeq.briggsae.WBls:0000003.control_mean
124.482From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000427.8081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
29.6765From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
31.5448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
29.4651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
29.5366From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
29.9614From_analysisRNASeq.briggsae.WBls:0000004.control_mean
31.4522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.425537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.981606From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.19395From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.1747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.32722From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.35432From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.72703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.44949From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.4104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.37802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.4336From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.48918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.94349From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.49634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004162.1054From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.91From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
78.5826From_analysisRNASeq.briggsae.WBls:0000041.control_median
79.2551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
82.8848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.37186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.4584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
44.1842From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.2889From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.85348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006324.3112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.4438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.5023From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.6676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
27.4534From_analysisRNASeq.briggsae.WBls:0000063.control_mean
35.3421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
26.5849From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.04From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.9732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010127.2258From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.8507From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.3775From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.0156From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132479
00132480
00132481
00132482
00132483
Ortholog (33)
ParalogWBGene00029035Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00029134Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029037Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in Notch signaling pathway and cell differentiation. Predicted to be located in membrane. Expressed in embryonic cell and germ line. Is an ortholog of C. elegans glp-1. In C. elegans, glp-1 is involved in several processes, including cytoplasmic streaming; positive regulation of cell population proliferation; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06809
Corresponding_CDS_historyCBG06809:bp194
CBG06809:bp212
CBG06809:bp255
Corresponding_transcriptCBG06809.1
Other_sequenceCRC02162_1
CBC12434_1
CJC00805_1
CR05082
CBC01038_1
CRC03670_1
CR05539
Experimental_infoExpr_patternExpr10979
Expr1065366
AntibodyWBAntibody00002428
Microarray_resultsGPL8303_CB6_WBGene00029022_A
GPL8303_CB6_WBGene00029022_B
GPL14143_CBG06809_3324-3383_0.897_29_B
GPL14143_CBG06809_3466-3525_0.927_10_A
GPL14143_CBG06809_3783-3842_0.708_269_C
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
ReferenceWBPaper00031365
WBPaper00032323
WBPaper00064734
MethodGene