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WormBase Tree Display for Gene: WBGene00028866

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Name Class

WBGene00028866SMapS_parentSequencecb25.fpc0156
IdentityVersion1
NameSequence_nameCBG06617
Molecular_nameCBG06617
CBG06617.1
CBP01700
Other_nameCBG_06617Accession_evidenceNDBHE601320
Public_nameCBG06617
DB_infoDatabaseNDBlocus_tagCBG_06617
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000241.7693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
54.4336From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
64.6925From_analysisRNASeq.briggsae.WBls:0000002.control_mean
97.8745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
141.289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
76.1541From_analysisRNASeq.briggsae.WBls:0000002.control_median
83.8416From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003134.361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
150.721From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
167.081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
129.398From_analysisRNASeq.briggsae.WBls:0000003.control_mean
86.751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000488.3644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
93.2646From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
98.1649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
102.735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
113.806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
80.6593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
96.7459From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002717.6252From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.7875From_analysisRNASeq.briggsae.WBls:0000027.control_mean
36.2307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.50648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
26.9279From_analysisRNASeq.briggsae.WBls:0000027.control_median
32.5096From_analysisRNASeq.briggsae.WBls:0000027.control_mean
70.6762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003547.7169From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003825.0727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
62.2045From_analysisRNASeq.briggsae.WBls:0000038.control_mean
73.7137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
73.9902From_analysisRNASeq.briggsae.WBls:0000038.control_median
74.2667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
75.7649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041102.454From_analysisRNASeq.briggsae.WBls:0000041.control_median
107.419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
116.589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
48.9505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
92.6118From_analysisRNASeq.briggsae.WBls:0000041.control_mean
97.4888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
59.2306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
75.8191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
84.2495From_analysisRNASeq.briggsae.WBls:0000041.control_mean
86.654From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
55.4416From_analysisRNASeq.briggsae.WBls:0000063.control_mean
61.1061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
62.8539From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
70.8From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
82.4479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
57.6126From_analysisRNASeq.briggsae.WBls:0000063.control_mean
65.6608From_analysisRNASeq.briggsae.WBls:0000063.control_median
68.4676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010162.8539From_analysisRNASeq.briggsae.total_over_all_stages.control_median
65.2974From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
70.8699From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
72.2569From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132333
Ortholog (25)
Structured_descriptionAutomated_descriptionPredicted to be involved in rRNA processing. Is an ortholog of C. elegans F53E10.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06617
Corresponding_CDS_historyCBG06617:bp194
Corresponding_transcriptCBG06617.1
Other_sequenceHbac_isotig03610
EX910975.1
ES743383.1
ES409786.1
CRC04728_1
CR08627
CJC15923_1
EX007011.1
CR08626
Experimental_infoExpr_patternExpr1050252
Microarray_resultsGPL8303_CB6_WBGene00028866_A
GPL14143_CBG06617_231-290_0.942_4_B
GPL14143_CBG06617_439-498_0.959_2_C
GPL14143_CBG06617_501-560_0.898_13_A
MethodGene