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WormBase Tree Display for Gene: WBGene00028841

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Name Class

WBGene00028841SMapS_parentSequencecb25.fpc0156
IdentityVersion1
NameSequence_nameCBG06591
Molecular_nameCBG06591
CBG06591.1
CBP01695
Other_nameCBG_06591Accession_evidenceNDBHE601320
Public_nameCBG06591
DB_infoDatabaseNDBlocus_tagCBG_06591
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.20363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.71936From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.7565From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.19795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.38706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.07178From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.13629From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.06854From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.137081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.045694From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.08415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.19008From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.29602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.84165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.01272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.06242From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.07754From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.448627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.77657From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.8714From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.18027From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.58398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.79954From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003526.0389From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.3971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
20.2994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.86671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.49583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.94647From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.76476From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.331513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.382986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.633554From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.884122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.26261From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.45183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.95086From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.06429From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.24446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.41027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.200101From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.44958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.550926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.110551From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.203601From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.221102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.08415From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.15378From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.04513From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.47995From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132292
00132293
Ortholog (32)
Paralog (13)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans F52F10.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06591
Corresponding_CDS_historyCBG06591:bp194
Corresponding_transcriptCBG06591.1
Other_sequenceCBC03934_1
Oden_isotig22314
Experimental_infoExpr_patternExpr1056580
Microarray_resultsGPL8303_CB6_WBGene00028841_A
GPL8303_CB6_WBGene00028841_B
GPL14143_CBG06591_1128-1187_0.935_2_C
GPL14143_CBG06591_1286-1345_0.930_5_A
GPL14143_CBG06591_1453-1512_0.791_112_B
MethodGene