WormBase Tree Display for Gene: WBGene00028459

WBGene00028459 SMap: S_parent: Sequence: cb25.fpc0143b
  Identity: Version: 2
    Name: CGC_name: Cbr-gfl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06140
      Molecular_name: CBG06140
        CBG06140.1
        CBP15531
      Other_name: CBG_06140 Accession_evidence: NDB HE600986
      Public_name: Cbr-gfl-1
    DB_info: Database: NDB locus_tag CBG_06140
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-gfl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gfl
    RNASeq_FPKM: WBls:0000002 40.2541 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        52.6774 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        55.3514 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        62.4266 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        146.645 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        58.889 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        76.1693 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 134.57 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        138.906 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        143.243 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        131.28 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        136.364 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 114.456 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        121.077 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        127.698 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        106.136 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        109.331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        121.097 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        147.865 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.842788 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        10.9612 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        27.5626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.47824 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        12.3727 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        13.2877 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        20.2671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 25.7186 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.8805 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        21.8091 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        22.0163 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        22.2234 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        25.9348 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        47.8263 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 27.7826 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        77.6393 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        92.7875 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        92.9394 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        93.0913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        96.8959 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        35.0377 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        38.1078 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        63.9505 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        65.4476 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 36.9138 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        37.838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        45.1117 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        46.5579 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        47.1964 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        65.7297 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        43.7125 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        44.4121 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        46.0837 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 40.2541 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        52.5623 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        44.4121 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        60.597 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131969
    Contained_in_operon: CBOPA0193
    Ortholog (36)
    Paralog: WBGene00038960 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans gfl-1. In C. elegans, gfl-1 is involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06140
    Corresponding_CDS_history: CBG06140:bp194
    Corresponding_transcript: CBG06140.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1068197
    Microarray_results: GPL8303_CB6_WBGene00028459_A
      GPL8303_CB6_WBGene00028459_B
      GPL14143_CBG06140_275-334_0.902_16_B
      GPL14143_CBG06140_413-472_0.961_1_C
      GPL14143_CBG06140_527-586_0.944_6_A
  Method: Gene