WormBase Tree Display for Gene: WBGene00028421

WBGene00028421 SMap: S_parent: Sequence: cb25.fpc0143b
  Identity: Version: 2
    Name: CGC_name: Cbr-dpy-20 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06089
      Molecular_name: CBG06089
        CBG06089.1
        CBP21693
      Other_name: CBG_06089 Accession_evidence: NDB HE600986
      Public_name: Cbr-dpy-20
    DB_info: Database: NDB locus_tag CBG_06089
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-dpy-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    RNASeq_FPKM: WBls:0000002 2.13939 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        2.6427 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.37932 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.35586 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.16781 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        2.39105 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        2.82644 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.141512 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.150596 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.15968 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.100397 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.170277 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.186581 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.202885 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.295074 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.341989 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.369771 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.390446 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.15253 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.231773 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.253722 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.275671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        22.6323 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        5.82307 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
      WBls:0000027 0.116043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.758799 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        14.8751 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        5.24998 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.56116 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.36352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        4.52837 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 15.9587 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.29059 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.06719 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        22.8232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.26624 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        6.4653 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        8.16157 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 0.05668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.10177 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.152561 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.203352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.269008 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.714229 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.20427 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.205188 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.301275 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.526432 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.613386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.787399 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.869732 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.941458 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.942809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.06361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.276771 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.770905 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.864429 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 0.758799 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.58221 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.569909 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.88227 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131919
    Ortholog (27)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans dpy-20. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06089
    Corresponding_CDS_history: CBG06089:bp194
    Corresponding_transcript: CBG06089.1
    Other_sequence: EY467652.1
      ACC10421_1
      Acan_isotig18415
  Experimental_info: Expr_pattern: Expr1053263
    Microarray_results: GPL8303_CB6_WBGene00028421_A
      GPL8303_CB6_WBGene00028421_B
      GPL14143_CBG06089_417-476_0.899_11_C
      GPL14143_CBG06089_1071-1130_0.831_63_A
      GPL14143_CBG06089_1144-1203_0.925_4_B
  Method: Gene