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WormBase Tree Display for Gene: WBGene00028281

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Name Class

WBGene00028281SMapS_parentSequencecb25.fpc0143a
IdentityVersion1
NameSequence_nameCBG05924
Molecular_nameCBG05924
CBG05924.1
CBP41154
Other_nameCBG_05924Accession_evidenceNDBHE600909
Public_nameCBG05924
DB_infoDatabaseNDBlocus_tagCBG_05924
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000217.3452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.7065From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.35From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.4243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.5098From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.3871From_analysisRNASeq.briggsae.WBls:0000002.control_median
31.9198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.838663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
3.34458From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.85049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.22972From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.2587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.37334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.81602From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.85636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.38552From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.44896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.46458From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002719.1023From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.6635From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
27.1211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.52227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
122.541From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.3923From_analysisRNASeq.briggsae.WBls:0000027.control_median
432.858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003521.2526From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038114.053From_analysisRNASeq.briggsae.WBls:0000038.control_mean
326.06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
39.8283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
60.1768From_analysisRNASeq.briggsae.WBls:0000038.control_median
80.5254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.79755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.9907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.1385From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.2863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
21.8347From_analysisRNASeq.briggsae.WBls:0000041.control_mean
55.7412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.32044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.38From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.4737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
23.1423From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.0417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006331.3239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
40.3603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
44.0267From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
44.8455From_analysisRNASeq.briggsae.WBls:0000063.control_mean
49.2704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
59.2464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.8945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
39.3537From_analysisRNASeq.briggsae.WBls:0000063.control_mean
42.1935From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010126.35From_analysisRNASeq.briggsae.total_over_all_stages.control_median
38.793From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.5686From_analysisRNASeq.briggsae.total_over_all_stages.control_median
43.9968From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (21)
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans F45E4.5. In C. elegans, F45E4.5 is involved in defense response to Gram-negative bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05924
Corresponding_CDS_historyCBG05924:bp194
CBG05924:bp255
Corresponding_transcriptCBG05924.1
Other_sequenceCJC00368_1
CR03760
Hbac_isotig00779
Tcol_isotig15601
Hbac_isotig00780
CRC05258_1
Acan_isotig13330
Tcol_isotig17694
Oden_isotig21916
Dviv_isotig26733
Experimental_infoExpr_patternExpr1051270
Microarray_resultsGPL8303_CB6_WBGene00028281_A
GPL14143_CBG05924_24-83_0.942_1_A
GPL14143_CBG05924_35-94_0.941_2_C
GPL14143_CBG05924_197-256_0.848_7_B
MethodGene